Identification and in silico analysis of a novel troponin C like gene from Ruditapes philippinarum (Bivalvia: Veneridae) and its transcriptional response for calcium challenge |
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| Authors: | Navaneethaiyer Umasuthan Don Anushka Sandaruwan Elvitigala Kasthuri Saranya Revathy Youngdeuk Lee Ilson Whang Myoung-Ae Park Jehee Lee |
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| Affiliation: | 1. Department of Marine Life Sciences, School of Marine Biomedical Sciences, Jeju National University, Jeju Special Self-Governing Province 690-756, Republic of Korea;2. Marine and Environmental Institute, Jeju National University, Jeju Special Self-Governing Province 690-814, Republic of Korea;3. Pathology Division, National Fisheries and Research & Developmental Institute, Busan 619-705, Republic of Korea |
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| Abstract: | |
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| Keywords: | 3D, three dimension ~, approximately AA, amino acid(s) bp, base pair(s) β-actin, beta actin gene CaCl2, calcium chloride Ca2 +, calcium ion cDNA, DNA complementary to RNA CDS, coding sequence Da, Dalton(s) dNTP, deoxyribonucleoside triphosphate EF-hand, EF hand is a helix&ndash loop&ndash helix structural domain found in a large family of calcium-binding proteins G, gaps I, identity IF, isoform i.m., intramuscular MIQE, Minimum Information for Publication of Quantitative Real-Time PCR ML, maximum likelihood mRNA, messenger RNA n, number PBS, phosphate buffered saline qPCR, quantitative real-time PCR Rp, Ruditapes philippinarum S, similarity sTnC, skeletal muscle TnC isoform TnC, troponin C gene TnC, troponin C protein TnI, troponin I TnT, troponin T TNNC1, troponin C1 TNNC2, troponin C2 Trp, tryptophan RNA, ribonucleotide UTR, untranslated region UI, uninjected &prime (prime), denotes a truncated gene at the indicated side |
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