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cGMP-binding prepares PKG for substrate binding by disclosing the C-terminal domain
Authors:Alverdi Vera  Mazon Hortense  Versluis Cees  Hemrika Wieger  Esposito Gennaro  van den Heuvel Robert  Scholten Arjen  Heck Albert J R
Institution:1 Department of Biomolecular Mass Spectrometry, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Sorbonnelaan 16, 3584 CA Utrecht, The Netherlands
2 Department of Biomedical and Biotechnological Science, Udine University, Udine, Italy
3 Department of Protein Crystallography, Bijvoet Center for Biomolecular Research, Utrecht University, Utrecht, The Netherlands
Abstract:Type I cyclic guanosine 3′,5′-monophosphate (cGMP)-dependent protein kinase (PKG) is involved in the nitric oxide/cGMP signaling pathway. PKG has been identified in many different species, ranging from unicelõlular organisms to mammals. The enzyme serves as one of the major receptor proteins for intracellular cGMP and controls a variety of cellular responses, ranging from smooth-muscle relaxation to neuronal synaptic plasticity. In the absence of a crystal structure, the three-dimensional structure of the homodimeric 152-kDa kinase PKG is unknown; however, there is evidence that the kinase adopts a distinct cGMP-dependent active conformation when compared to the inactive conformation. We performed mass-spectrometry-based hydrogen/deuterium exchange experiments to obtain detailed information on the structural changes in PKG Iα induced by cGMP activation. Site-specific exchange measurements confirmed that the autoinhibitory domain and the hinge region become more solvent exposed, whereas the cGMP-binding domains become more protected in holo-PKG (dimeric PKG saturated with four cGMP molecules bound). More surprisingly, our data revealed a specific disclosure of the substrate-binding region of holo-PKG, shedding new light into the kinase-activation process of PKG.
Keywords:cGMP  cyclic guanosine 3&prime    5&prime  -monophosphate  PKG  cGMP-dependent protein kinase  holo-PKG  dimeric PKG saturated with four cGMP molecules bound  PKA  cAMP-dependent protein kinase  H/D  hydrogen/deuterium  MALDI-MS  matrix-assisted laser desorption ionization mass spectrometry  apo-PKG  dimeric PKG without cGMP  HDX-MS  H/D exchange mass spectrometry  ESI-MS  electrospray ionization mass spectrometry  EDTA  ethylenediaminetetraacetic acid  TOF  time of flight
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