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A method to associate all possible combinations of genetic and environmental factors using GxE landscape plot
Authors:Satoshi Nagaie  Soichi Ogishima  Jun Nakaya  Hiroshi Tanaka
Affiliation:1Dept of Bioclinical Informatics, Tohoku Medical Megabank Organization, Tohoku University;2Medical IT Center, School of Medicine, Tohoku University;3Dept. of Bioinformatics, Medical Research Institute, Tokyo Medical and Dental University
Abstract:
AbbreviationsGxE - Gene-environment interactions, GWAS - Genome-wide association study, MAFs - Minor allele frequencies, SNPs - Single nucleotide polymorphisms, EWAS - Environment-wide association study, FDR - False discovery rate, JPT+CHB - HapMap population of Japanese in Tokyo, Japan - Han Chinese in Beijing.
Keywords:
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