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UDP-N-acetylglucosamine enolpyruvyl transferase from Pseudomonas aeruginosa
Authors:Smita Dube  Kamna Nanda  Reema Rani  Namrata Jit Kaur  Jatin Kumar Nagpal  Dilip J. Upadhyay  Ian A. Cliffe  Kulvinder Singh Saini  Kedar P. Purnapatre
Affiliation:(1) Department of Infectious Diseases, New Drug Discovery Research, Ranbaxy Research Laboratories, Udyog Vihar Industrial Area, Plot No. 20, Sector 18, Gurgaon, 122001, Haryana, India;(2) Department of Medicinal Chemistry, Ranbaxy Research Laboratories, Udyog Vihar Industrial Area, Plot # 20, Sector 18, Gurgaon, 122001, India;(3) Department of Biotechnology, Ranbaxy Research Laboratories, Udyog Vihar Industrial Area, Plot # 20, Sector 18, Gurgaon, 122001, India;
Abstract:Multi-drug resistant Pseudomonas aeruginosa (MDRPA) are emerging as a major threat in the hospitals as they have become resistant to current antibiotics. There is an immediate requirement of drugs with novel mechanisms as the pipeline of investigational drugs against these organisms is lean. UDP-N-acetylglucosamine enolpyruvyl transferase (MurA) enzyme that catalyzes the first committed step of bacterial cell wall biosynthesis is an ideal target for the discovery of novel antibiotics against Gram negative pathogens as they have only one copy of murA gene in its genome. We have performed biochemical characterization and comparative kinetic analysis of MurA from E. coli and P. aeruginosa. Both enzymes were active at broad range of pH with temperature optima of 37°C. Metal ions did not enhance the activity of both enzymes. These enzymes had an apparent affinity constant (K m ) for its substrate UDP-N-acetylglucosamine 36 ± 5.2 and 17.8 ± 2.5 μM and for phosphoenolpyruvate 0.84 ± 0.13 μM and 0.45 ± 0.07 μM for E. coli and P. aeruginosa enzymes respectively. Both the enzymes showed 5–7 fold shift in IC50 for the known inhibitor fosfomycin upon pre-incubation with the substrate UDP-N-acetylglucosamine. This observation was used to develop a novel rapid sensitive high throughput assay for the screening of MurA inhibitors.
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