Interfacing similarity search software with the sequence retrieval system ACNUC |
| |
Authors: | Higgins Desmond G; Gouy Manolo |
| |
Institution: | Department of Genetics, Trinity College Dublin 2, Ireland
1Laboratoire de Biometrie, Universite Claude Bernard Lyon I 69622 Villeurbanne Cedex, France |
| |
Abstract: | A method of interfacing sequence similarity search softwarewith the fast sequence retrieval system ACNUC is described.The method is written in FORTRAN 77 and is straightforward toimplement because no textprocessing code is required a minimum of 12 extra lines of FORTRAN provided the interfacefor most applications. The method is also efficient, since sequencesare located by simple indexing techniques, with no linear searchesof large database files necessary.
Received on November 20, 1986; accepted on January 8, 1987 |
| |
Keywords: | |
本文献已被 Oxford 等数据库收录! |
|