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Polymorphism of DNA conformation inside the bacteriophage capsid
Authors:Amélie Leforestier
Affiliation:1. Laboratoire de Physqiue des Solides, CNRS, UMR 8502, Université Paris Sud, Orsay, France
Abstract:
Double-stranded DNA bacteriophage genomes are packaged into their icosahedral capsids at the highest densities known so far (about 50 % w:v). How the molecule is folded at such density and how its conformation changes upon ejection or packaging are fascinating questions still largely open. We review cryo-TEM analyses of DNA conformation inside partially filled capsids as a function of the physico-chemical environment (ions, osmotic pressure, temperature). We show that there exists a wide variety of DNA conformations. Strikingly, the different observed structures can be described by some of the different models proposed over the years for DNA organisation inside bacteriophage capsids: either spool-like structures with axial or concentric symmetries, or liquid crystalline structures characterised by a DNA homogeneous density. The relevance of these conformations for the understanding of DNA folding and unfolding upon ejection and packaging in vivo is discussed.
Keywords:Bacteriophage   DNA packaging   DNA ejection   Cryo-electron microscopy
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