Respiratory burst oxidase homologue‐dependent H2O2 and chloroplast H2O2 are essential for the maintenance of acquired thermotolerance during recovery after acclimation

Thermotolerance is improved by heat stress (HS) acclimation, and the thermotolerance level is “remembered” by plants. However, the underlying signalling mechanisms remain largely unknown. Here, we showed NADPH oxidase‐mediated H₂O₂ (NADPH‐H₂O₂), and chloroplast‐H₂O₂ promoted the sustained expression of HS‐responsive genes and programmed cell death (PCD) genes, respectively, during recovery after HS acclimation. When spraying the NADPH oxidase inhibitor, diphenylene iodonium, after HS acclimation, the NADPH‐H₂O₂ level significantly decreased, resulting in a decrease in the expression of HS‐responsive genes and the loss of maintenance of acquired thermotolerance (MAT). In contrast, compared with HS acclimation, NADPH‐H₂O₂ declined but chloroplast‐H₂O₂ further enhanced during recovery after HS over‐acclimation, resulting in the reduced expression of HS‐responsive genes and substantial production of PCD. Notably, the further inhibition of NADPH‐H₂O₂ after HS over‐acclimation also inhibited chloroplast‐H₂O₂, alleviating the severe PCD and surpassing the MAT of HS over‐acclimation treatment. Due to the change in subcellular H₂O₂ after HS acclimation, the tomato seedlings maintained a constant H₂O₂ level during recovery, resulting in stable and lower total H₂O₂ levels during a tester HS challenge conducted after recovery. We conclude that tomato seedlings increase their MAT by enhancing NADPH‐H₂O₂ content and controlling chloroplast‐H₂O₂ production during recovery, which enhances the expression of HS‐responsive genes and balances PCD levels, respectively.