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家蝇转铁蛋白基因的克隆和生物信息学分析
引用本文:龚晓林,张洁,李显航,刘红美. 家蝇转铁蛋白基因的克隆和生物信息学分析[J]. 生物信息学, 2012, 10(4): 234-237
作者姓名:龚晓林  张洁  李显航  刘红美
作者单位:1. 贵阳医学院图书馆技术部,贵州贵阳,550004
2. 贵阳医学院医学生物技术教研室,贵州贵阳,550004
基金项目:项目基金:贵阳医学院联合基金,贵州省人才领导小组基金
摘    要:为了研究家蝇转铁蛋白基因功能,获得全长cDNA序列并对其蛋白序列进行生物信息学分析,利用在线分析程序和相关工具软件分析转铁蛋白基因的开放读码框,分析编码蛋白的理化性质、结构域、并预测其空间结构和功能。结果表明家蝇转铁蛋白基因编码蛋白由622个氨基酸组成,分子量为70.58kDa,理论等电点为5.33,为稳定蛋白,有跨膜区,含有信号肽,该蛋白属于TR-FER保守结构域家族,亚细胞定位于细胞核,二级结构以无规则卷曲为主,功能预测该蛋白具有酶活性。

关 键 词:家蝇  转铁蛋白  生物信息学

Cloning and bioinformatics analysis of transferrin gene of Musca domestica (Housefly)
GONG Xiao-lin , ZHANG Jie , LI Xian-hang , LIU Hong-mei. Cloning and bioinformatics analysis of transferrin gene of Musca domestica (Housefly)[J]. Chinese Journal of Bioinformatics, 2012, 10(4): 234-237
Authors:GONG Xiao-lin    ZHANG Jie    LI Xian-hang    LIU Hong-mei
Affiliation:2* (1.Department of Technology of Library ,Gui Yang Medical College, Gui Yang Gui Zhou 550004,China; 2.Department of Medical Biotechnology ,Gui Yang Medical College, Gui Yang Gui Zhou 550004,China)
Abstract:To obtain and perform the bioinformatics analysis of Transferrin gene of Musca domestica(Housefly) so as to provide the basis for its' function research. Internet online procedures and the related software were exploited to analyze the open reading frame (ORF) of Transferrin gene, physical and chemical properties of Transferrin protein and the domains of the protein, and predict the space structure and functions of the protein. The Transferrin protein sequence was composed of 622 amino acids with 70.58 kDa of the molecular weight. Theoretical isoelectric point was 5.33. The protein was stable and had structures of transmembrane and signal peptide. The protein belonged to the family of TR - FER. The protein probably located in nucleus and dominated by random coils in second struc- ture. The ProtFun result showed the protein has enzymatic activity.
Keywords:Musca domestica  Transferrin  Bioinformatics
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