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MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Datasets

Authors:	Kevin A Kovalchik Qing Ma Laura Wessling Frederic Saab Jérôme D Duquette Peter Kubiniok David J Hamelin Pouya Faridi Chen Li Anthony W Purcell Anne Jang Eustache Paramithiotis Marco Tognetti Lukas Reiter Roland Bruderer Joël Lanoix Éric Bonneil Mathieu Courcelles Isabelle Sirois

Institution:	1. CHU Sainte-Justine Research Center, Montreal, Quebec, Canada;2. School of Electrical Engineering and Computer Science, Faculty of Engineering, University of Ottawa, Ontario, Canada;3. Infection and Immunity Program and Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia;4. CellCarta, Montreal, Quebec, Canada;5. Biognosys, Schlieren, Switzerland;6. Institute of Research in Immunology and Cancer, Montreal, Quebec, Canada;7. Department of Chemistry, Université de Montréal, Montreal, Quebec, Canada;8. Department of Pathology and Cellular Biology, Faculty of Medicine, Université de Montréal, Quebec, Canada

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Keywords:	MHC peptide immunopeptidomics software MS BA"} {"#name":"keyword" "$":{"id":"kwrd0040"} "$$":[{"#name":"text" "_":"binding affinity BF"} {"#name":"keyword" "$":{"id":"kwrd0050"} "$$":[{"#name":"text" "_":"binding fraction CLI"} {"#name":"keyword" "$":{"id":"kwrd0060"} "$$":[{"#name":"text" "_":"command line interface EL"} {"#name":"keyword" "$":{"id":"kwrd0070"} "$$":[{"#name":"text" "_":"eluted ligand GUI"} {"#name":"keyword" "$":{"id":"kwrd0080"} "$$":[{"#name":"text" "_":"graphical user interface HLA"} {"#name":"keyword" "$":{"id":"kwrd0090"} "$$":[{"#name":"text" "_":"human leukocyte antigen KLD"} {"#name":"keyword" "$":{"id":"kwrd0090x"} "$$":[{"#name":"text" "_":"Kullback-Leibler Distance LF"} {"#name":"keyword" "$":{"id":"kwrd0100"} "$$":[{"#name":"text" "_":"length fraction MHC"} {"#name":"keyword" "$":{"id":"kwrd0110"} "$$":[{"#name":"text" "_":"major histocompatibility complex MVP"} {"#name":"keyword" "$":{"id":"kwrd0120"} "$$":[{"#name":"text" "_":"MhcVizPipe NB"} {"#name":"keyword" "$":{"id":"kwrd0130"} "$$":[{"#name":"text" "_":"nonbinder QC"} {"#name":"keyword" "$":{"id":"kwrd0140"} "$$":[{"#name":"text" "_":"quality control SB"} {"#name":"keyword" "$":{"id":"kwrd0150"} "$$":[{"#name":"text" "_":"strong binder WB"} {"#name":"keyword" "$":{"id":"kwrd0160"} "$$":[{"#name":"text" "_":"weak binder WSL"} {"#name":"keyword" "$":{"id":"kwrd0170"} "$$":[{"#name":"text" "_":"Windows Subsystem for Linux
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