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Characterization of Afp1, an antifreeze protein from the psychrophilic yeast Glaciozyma antarctica PI12
Authors:Noor Haza Fazlin Hashim  Izwan Bharudin  Douglas Law Sie Nguong  Sakura Higa  Farah Diba Abu Bakar  Sheila Nathan  Amir Rabu  Hidehisa Kawahara  Rosli Md Illias  Nazalan Najimudin  Nor Muhammad Mahadi  Abdul Munir Abdul Murad
Institution:1. School of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600, Bangi, Selangor, Malaysia
2. Department of Life Science and Biotechnology, Kansai University, 3-3-35 Yamate-cho, Suita, Osaka, 564-8680, Japan
3. Malaysia Genome Institute, 43000, Kajang, Selangor, Malaysia
4. Department of Bioprocess Engineering, Faculty of Chemical and Natural Resources Engineering, Universiti Teknologi Malaysia, 81310, Skudai, Johor, Malaysia
5. School of Biological Sciences, Universiti Sains Malaysia, 11800, Penang, Malaysia
Abstract:The psychrophilic yeast Glaciozyma antarctica demonstrated high antifreeze activity in its culture filtrate. The culture filtrate exhibited both thermal hysteresis (TH) and ice recrystallization inhibition (RI) properties. The TH of 0.1 °C was comparable to that previously reported for bacteria and fungi. A genome sequence survey of the G. antarctica genome identified a novel antifreeze protein gene. The cDNA encoded a 177 amino acid protein with 30 % similarity to a fungal antifreeze protein from Typhula ishikariensis. The expression levels of AFP1 were quantified via real time-quantitative polymerase chain reaction (RT-qPCR), and the highest expression levels were detected within 6 h of growth at ?12 °C. The cDNA of the antifreeze protein was cloned into an Escherichia coli expression system. Expression of recombinant Afp1 in E. coli resulted in the formation of inclusion bodies that were subsequently denatured by treatment with urea and allowed to refold in vitro. Activity assays of the recombinant Afp1 confirmed the antifreeze protein properties with a high TH value of 0.08 °C.
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