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The peculiar heme pocket of the 2/2 hemoglobin of cold-adapted Pseudoalteromonas haloplanktis TAC125
Authors:Barry D. Howes  Daniela Giordano  Leonardo Boechi  Roberta Russo  Simona Mucciacciaro  Chiara Ciaccio  Federica Sinibaldi  Maria Fittipaldi  Marcelo A. Mart��  Dar��o A. Estrin  Guido di Prisco  Massimo Coletta  Cinzia Verde  Giulietta Smulevich
Affiliation:1. Dipartimento di Chimica, Universit?? di Firenze, 50019, Sesto Fiorentino (FI), Italy
3. Institute of Protein Biochemistry, CNR, 80131, Naples, Italy
4. Departemento de Qu??mica Inorg??nica, Anal??tica y Qu??mica F??sica/INQUIMAE-CONICET, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, C1428EHA, Buenos Aires, Argentina
5. Dipartimento di Medicina Sperimentale e Scienze Biochimiche, Universit?? di Roma Tor Vergata, 00133, Rome, Italy
6. Consorzio Interuniversitario di Ricerca in Chimica dei Metalli nei Sistemi Biologici, 70126, Bari, Italy
2. INSTM (Consorzio Interuniversitario per la Scienza e Tecnologia dei Materiali), 50019, Sesto Fiorentino (FI), Italy
Abstract:
The genome of the cold-adapted bacterium Pseudoalteromonas haloplanktis TAC125 contains multiple genes encoding three distinct monomeric hemoglobins exhibiting a 2/2 ??-helical fold. In the present work, one of these hemoglobins is studied by resonance Raman, electronic absorption and electronic paramagnetic resonance spectroscopies, kinetic measurements, and different bioinformatic approaches. It is the first cold-adapted bacterial hemoglobin to be characterized. The results indicate that this protein belongs to the 2/2 hemoglobin family, Group II, characterized by the presence of a tryptophanyl residue on the bottom of the heme distal pocket in position G8 and two tyrosyl residues (TyrCD1 and TyrB10). However, unlike other bacterial hemoglobins, the ferric state, in addition to the aquo hexacoordinated high-spin form, shows multiple hexacoordinated low-spin forms, where either TyrCD1 or TyrB10 can likely coordinate the iron. This is the first example in which both TyrCD1 and TyrB10 are proposed to be the residues that are alternatively involved in heme hexacoordination by endogenous ligands.
Keywords:
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