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Solution structure of the antifreeze-like domain of human sialic acid synthase
Authors:Hamada Toshiyuki  Ito Yoko  Abe Takamasa  Hayashi Fumiaki  Güntert Peter  Inoue Makoto  Kigawa Takanori  Terada Takaho  Shirouzu Mikako  Yoshida Mayumi  Tanaka Akiko  Sugano Sumio  Yokoyama Shigeyuki  Hirota Hiroshi
Affiliation:RIKEN Genomic Sciences Center, Yokohama 230-0045, Japan.
Abstract:The structure of the C-terminal antifreeze-like (AFL) domain of human sialic acid synthase was determined by NMR spectroscopy. The structure comprises one alpha- and two single-turn 3(10)-helices and two beta-strands, and is similar to those of the type III antifreeze proteins. Evolutionary trace analyses of the type III antifreeze protein family suggested that the class-specific residues in the human and bacterial AFL domains are important for their substrate binding, while the class-specific residues of the fish antifreeze proteins are gathered on the ice-binding surface.
Keywords:NMR   protein structure   antifreeze-like domain   sialic acid synthase   structural genomics
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