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生物信息学在工业生物催化研究中的应用
引用本文:于慧敏,罗晖,史悦,孙旭东,沈忠耀.生物信息学在工业生物催化研究中的应用[J].生物工程学报,2004,20(3):325-331.
作者姓名:于慧敏  罗晖  史悦  孙旭东  沈忠耀
作者单位:清华大学化工系,生物化工研究所,北京,100084
基金项目:国家自然科学基金面上项目 (No .2 0 2 0 60 14 ),全国优秀博士学位论文作者专项资金资助项目~~
摘    要:随着石油等不可再生资源的日益减少以及环境污染问题的日益严重,应用工业生物催化技术改造或取代传统化工工艺已经成为新世纪化学工业可持续发展的研究热点。工业生物催化技术的研究对象是生物催化剂及其催化过程。近来,利用生物信息学技术进行工业生物催化研究已经越来越受到人们的重视。随着工业生物催化的发展,生物信息学将直接指导并加快新型高效生物催化剂的发现及功能改造进程。

关 键 词:工业生物催化,  生物催化剂,  生物信息学
文章编号:1000-3061(2004)03-0325-07
修稿时间:2003年9月29日

Application of Bioinformatics in Researches of Industrial Biocatalysis
YU Hui-Min LUO Hui SHI Yue SUN Xu-Dong SHEN Zhong-Yao.Application of Bioinformatics in Researches of Industrial Biocatalysis[J].Chinese Journal of Biotechnology,2004,20(3):325-331.
Authors:YU Hui-Min LUO Hui SHI Yue SUN Xu-Dong SHEN Zhong-Yao
Institution:Department of Chemical Engineering, Institute of Biochemical Engineering, Tsinghua University, Beijing 100084, China. yuhm@tsinghua.edu.cn
Abstract:Industrial biocatalysis is currently attracting much attention to rebuild or substitute traditional producing process of chemicals and drugs. One of key focuses in industrial biocatalysis is biocatalyst, which is usually one kind of microbial enzyme. In the recent, new technologies of bioinformatics have played and will continue to play more and more significant roles in researches of industrial biocatalysis in response to the waves of genomic revolution. One of the key applications of bioinformatics in biocatalysis is the discovery and identification of the new biocatalyst through advanced DNA and protein sequence search, comparison and analyses in Internet database using different algorithm and software. The unknown genes of microbial enzymes can also be simply harvested by primer design on the basis of bioinformatics analyses. The other key applications of bioinformatics in biocatalysis are the modification and improvement of existing industrial biocatalyst. In this aspect, bioinformatics is of great importance in both rational design and directed evolution of microbial enzymes. Based on the successful prediction of tertiary structures of enzymes using the tool of bioinformatics, the undermentioned experiments, i.e. site-directed mutagenesis, fusion protein construction, DNA family shuffling and saturation mutagenesis, etc, are usually of very high efficiency. On all accounts, bioinformatics will be an essential tool for either biologist or biological engineer in the future researches of industrial biocatalysis, due to its significant function in guiding and quickening the step of discovery and/or improvement of novel biocatalysts.
Keywords:industrial biocatalysis  biocatalyst  bioinformatics
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