In Search of Selective Inhibitors of Cysteine Protease,Cathepsin K |
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Authors: | Email author" target="_blank">Ewa?WieczerzakEmail author Piotr?Drabik Magnus?Abrahamson Anders?Grubb |
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Institution: | (1) Faculty of Chemistry, University of Gdańsk, Sobieskiego 18, 80-952 Gdańsk, Poland;(2) National Institute for Nanotechnology, National Research Council of Canada, AB, Edmonton, T6G2V4, Canada;(3) Department of Clinical Chemistry, Lund University Hospital, Lund, S-221 85, Sweden |
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Abstract: | Two potential azapeptide inhibitors of cathepsin K were designed and synthesized. To analyze in detail interactions between these azainhibitors and the investigated cysteine protease, molecular dynamics simulations were performed. For the obtained compounds the equilibrium constants for dissociation of inhibitor – enzyme complex, Ki, were determined. The examined azapeptides proved to be not as potent inhibitors of cathepsin K as they were expected to be according to the results of simulations. However, these calculations provide valuable information about probable structures of this type of peptidomimetics in the catalytic pocket of cathepsin K, which could be useful in designing of more selective inhibitors of this cysteine protease. |
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Keywords: | Azapeptide cathepsin K cysteine protease inhibitor molecular dynamics |
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