Mapping of a wide compatibility locus in indica rice using SSR markers |
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Authors: | R B Li Y Z Chen Y P Wei Ch Liu Z F Ma D H Huang Y X Zhang W L Lu |
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Institution: | (1) Guangxi Key Laboratory of Subtropical Bioresource Conversation and Utilization, Guangxi University, 530005 Nanning, China;(2) Guangxi Crop Genetic Improvement and Biotechnology Lab, Guangxi Academy of Agricultural Sciences, #174, Eastern Daxue Road, 530007 Nanning, Guangxi, China;(3) Agro-information Research Institute, Guangxi Academy of Agricultural Sciences, 530007 Nanning, China;(4) Rice Research Institute, Guangxi Academy of Agricultural Sciences, 530007 Nanning, China |
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Abstract: | Hybrid sterility between indica and japonica subspecies in rice is basically caused by partial abortion of gametes and hybrid fertility could be recovered by a single
wide compatibility (WC) allele. In this study, a typical indica germplasm source of rice, UPRI 95-162, with strong wide compatibility
in cross with japonica rice was studied for location of its WC locus. Bulked segregant analysis was performed and SSRs (simple
sequence repeats) were conducted on a F1 population derived from a three-way cross (UPRI 95-162/T8//Akihikari). The locus was located on chromosome 1 approximately
0.2 cM to SSR markers RM581 on one side and 1.5 cM to RM292 on another. This WC locus, tentatively designated as S-20
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(t), and its tight linkage markers, RM581 and RM292, would be very useful for efficient marker-assisted selection for breeding
new WC varieties and for map-based cloning of the gene. |
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Keywords: | Hybrid sterility Oryza sativa Rice SSR marker Wide compatibility |
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