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The crystal structure of the bacteriophage PSA endolysin reveals a unique fold responsible for specific recognition of Listeria cell walls
Authors:Korndörfer Ingo P  Danzer Joseph  Schmelcher Mathias  Zimmer Markus  Skerra Arne  Loessner Martin J
Institution:Technische Universit?t München, Lehrstuhl für Biologische Chemie, An der Saatzucht 5, D-85350 Freising, Germany. ipk@crystax.com
Abstract:Bacteriophage murein hydrolases exhibit high specificity towards the cell walls of their host bacteria. This specificity is mostly provided by a structurally well defined cell wall-binding domain that attaches the enzyme to its solid substrate. To gain deeper insight into this mechanism we have crystallized the complete 314 amino acid endolysin from the temperate Listeria monocytogenes phage PSA. The crystal structure of PlyPSA was determined by single wavelength anomalous dispersion methods and refined to 1.8 A resolution. The two functional domains of the polypeptide, providing cell wall-binding and enzymatic activities, can be clearly distinguished and are connected via a linker segment of six amino acid residues. The core of the N-acetylmuramoyl-L-alanine amidase moiety is formed by a twisted, six-stranded beta-sheet flanked by six helices. Although the catalytic domain is unique among the known Listeria phage endolysins, its structure is highly similar to known phosphorylase/hydrolase-like alpha/beta-proteins, including an autolysin amidase from Paenibacillus polymyxa. In contrast, the C-terminal domain of PlyPSA features a novel fold, comprising two copies of a beta-barrel-like motif, which are held together by means of swapped beta-strands. The architecture of the enzyme with its two separate domains explains its unique substrate recognition properties and also provides insight into the lytic mechanisms of related Listeria phage endolysins, a class of enzymes that bear biotechnological potential.
Keywords:CBD  cell wall-binding domain  CPD-2  duck carboxypeptidase D domain II  CwlV  l-alanine amidase from Paenibacillus polymyxa var" target="_blank">cell wall lytic N-acetylmuramoyl-l-alanine amidase from Paenibacillus polymyxa var  Colistinus  EAD  enzymatically active domain  PDB  Protein Data Bank  PEG  polyethylene glycol  PlyPSA  Listeria monocytogenes phage PSA endolysin  Ply500  bacteriophage 500 endolysin  r  m  s  d    root mean square deviation  SAD  single wavelength anomalous dispersion  SeMet  seleno-methionine
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