Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15(T)) |
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| Authors: | Hans-Peter Klenk Megan Lu Susan Lucas Alla Lapidus Alex Copeland Sam Pitluck Lynne A Goodwin Cliff Han Roxanne Tapia Evelyne-Marie Brambilla Gabriele Pötter Miriam Land Natalia Ivanova Manfred Rohde Markus Göker John C Detter Wen-Jun Li Nikos C Kyrpides Tanja Woyke |
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| Affiliation: | 1.Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany;2.Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA;3.DOE Joint Genome Institute, Walnut Creek, California, USA;4.Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA;5.HZI – Helmholtz Centre for Infection Research, Braunschweig, Germany;6.Yunnan Institute of Microbiology, Yunnan University, Kunming, China |
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| Abstract: | ![]()
Saccharomonospora marina Liu et al. 2010 is a member of the genus Saccharomonospora, in the family Pseudonocardiaceae that is poorly characterized at the genome level thus far. Members of the genus Saccharomonospora are of interest because they originate from diverse habitats, such as leaf litter, manure, compost, surface of peat, moist, over-heated grain, and ocean sediment, where they might play a role in the primary degradation of plant material by attacking hemicellulose. Organisms belonging to the genus are usually Gram-positive staining, non-acid fast, and classify among the actinomycetes. Here we describe the features of this organism, together with the complete genome sequence (permanent draft status), and annotation. The 5,965,593 bp long chromosome with its 5,727 protein-coding and 57 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI). |
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| Keywords: | aerobic chemoheterotrophic Gram-positive vegetative and aerial mycelia spore-forming non-motile marine bacterium Pseudonocardiaceae CSP 2010 |
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