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Conformational studies of a benzodiazepine-like peptide in SDS micelles by circular dichroism, 1H NMR and molecular dynamics simulation
Authors:Marc Lecouvey  Céline Frochot  Laurent Miclo  Piotr Orlewski  Michel Marraud  Jean-Luc Gaillard  Manh Thong Cung and Régis Vanderesse
Institution:(1) LCPM, CNRS-URA 494, ENSIC-INPL, BP 451, F-54001 Nancy Cedex, France;(2) LBSA, Unité associée à l'INRA, Université Henri Poincaré, BP 239, F-54506 Vandoeuvre lès Nancy Cedex, France
Abstract:The conformation of a benzodiazepine-like decapeptide corresponding tothe YLGYLEQLLR fragment of a casein has been examined in a sodium dodecylsulfate micellar medium using circular dichroism, two-dimensional1H NMR spectroscopy and restrained molecular dynamicssimulation. The decapeptide adopts an amphipathic 310-helicoidstructure in which theE6···R10 ionic bridgestabilizes the C-terminus.
Keywords:Benzodiazepines  Circular dichroism  GABAAreceptor  Micellar medium  Molecular dynamics  2D NMR
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