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Distal-to-proximal NO conversion in hemoproteins: the role of the proximal pocket
Authors:Hough Michael A  Antonyuk Svetlana V  Barbieri Sonia  Rustage Neil  McKay Alison L  Servid Amy E  Eady Robert R  Andrew Colin R  Hasnain S Samar
Institution:
  • 1 Molecular Biophysics Group, Faculty of Health and Life Sciences, University of Liverpool, Liverpool L69 7ZB, UK
  • 2 School of Chemistry, University of Wales Bangor, Bangor, Gywnedd LL57 2UW, UK
  • 3 Liverpool John Moores University, Byrom Street, Liverpool L3 3AF, UK
  • 4 Department of Chemistry and Biochemistry, Eastern Oregon University, La Grande, OR 97850, USA
  • Abstract:Hemoproteins play central roles in the formation and utilization of nitric oxide (NO) in cellular signaling, as well as in protection against nitrosative stress. Key to heme-nitrosyl function and reactivity is the Fe coordination number (5 or 6). For (five-coordinate) 5c-NO complexes, the potential for NO to bind on either heme face exists, as in the microbial cytochrome c′ from Alcaligenes xylosoxidans (AxCYTcp), which forms a stable proximal 5c-NO complex via a distal six-coordinate NO intermediate and a putative dinitrosyl species. Strong parallels between the NO-binding kinetics of AxCYTcp, the eukaryotic NO sensor soluble guanylate cyclase, and the ferrocytochrome c/cardiolipin complex have led to the suggestion that a distal-to-proximal NO switch could contribute to the selective ligand responses in gas-sensing hemoproteins. The proximal NO-binding site in AxCYTcp is close to a conserved basic (Arg124) residue that is postulated to modulate NO reactivity. We have replaced Arg124 by five different amino acids and have determined high-resolution (1.07-1.40 Å) crystallographic structures with and without NO. These, together with kinetic and resonance Raman data, provide new insights into the mechanism of distal-to-proximal heme-NO conversion, including the determinants of Fe-His bond scission. The Arg124Ala variant allowed us to determine the structure of an analog of the previously unobserved key 5c-NO distal intermediate species. The very high resolution structures combined with the extensive spectroscopic and kinetic data have allowed us to provide a fresh insight into heme reactivity towards NO, a reaction that is of wide importance in biology.
    Keywords:NO  nitric oxide  AxCYTcp  cytochrome c&prime  from Alcaligenes xylosoxidans  sGC  soluble guanylate cyclase  5c  five-coordinate  6c  six-coordinate  RR  resonance Raman  PDB  Protein Data Bank
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