Identification of specific proteins from seed embryos by two-dimensional gel electrophoresis for the discrimination between indica and japonica rice |
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Authors: | H Saruyama N Shinbashi |
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Institution: | (1) Hokkaido Green-Bio Institute, Higashi 5 Kita 15, Naganuma, Yubari-gun, 069-13 Hokkaido, Japan;(2) Present address: Hokkaido Dounan Agricultural Experiment Station, Oono, Kameda, 041-12 Hokkaido, Japan |
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Abstract: | Summary Proteins extracted from seed embryos of 29 different cultivated rice (Oryza sativa L.) and one wild rice (O. rufipogon Griff.) were compared by two-dimensional gel electrophoresis analysis. Among more than 300 protein spots on the gel we found some interesting variations in ten spots which were individually designated as proteins A-J. Protein E was observed in all indica cultivars but was not found in those of the subspecies japonica. In contrast, protein F was only detected in japonica cultivars. Protein A existed in all japonica cultivars but, with the exception of IR-36, could not be found in other indica cultivars. Therefore, proteins A, E and F can be used as markers for the identification of indica and japonica. Some so-called Javanica cultivars showed the characteristics of japonica subspecies with regard to proteins A and F, while one other cultivar of Javanica expressed a type intermediate between indica and japonica interms of proteins A and E. One feature discriminating between Javanica and japonica cultivars was found in the D, G, and J proteins which were expressed strongly in Javanica cultivars but were scarcely expressed in those of japonica. Expression of subspecies-specific proteins E and F in f1 hybrids was also investigated. |
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Keywords: | Rice Oryza sativa L Seed embryo proteins Rice subspecies Two-dimensional gel electrophoresis |
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