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Systems biology approaches to study the molecular effects of caloric restriction and polyphenols on aging processes
Authors:Sébastien Lacroix  Mario Lauria  Marie-Pier Scott-Boyer  Luca Marchetti  Corrado Priami  Laura Caberlotto
Institution:The Microsoft Research, University of Trento Centre for Computational Systems Biology (COSBI), Piazza Manifattura 1, 38068 Rovereto, Italy ;Department of Mathematics, University of Trento, Via Sommarive 14, 38123 Povo, Italy
Abstract:Worldwide population is aging, and a large part of the growing burden associated with age-related conditions can be prevented or delayed by promoting healthy lifestyle and normalizing metabolic risk factors. However, a better understanding of the pleiotropic effects of available nutritional interventions and their influence on the multiple processes affected by aging is needed to select and implement the most promising actions. New methods of analysis are required to tackle the complexity of the interplay between nutritional interventions and aging, and to make sense of a growing amount of -omics data being produced for this purpose. In this paper, we review how various systems biology-inspired methods of analysis can be applied to the study of the molecular basis of nutritional interventions promoting healthy aging, notably caloric restriction and polyphenol supplementation. We specifically focus on the role that different versions of network analysis, molecular signature identification and multi-omics data integration are playing in elucidating the complex mechanisms underlying nutrition, and provide some examples on how to extend the application of these methods using available microarray data.

Electronic supplementary material

The online version of this article (doi:10.1007/s12263-015-0508-9) contains supplementary material, which is available to authorized users.
Keywords:Network analysis  Multi-omics integration  Glutamate receptors  Oxidative stress  Inflammation  Healthy aging
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