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Systematic exploration of essential yeast gene function with temperature-sensitive mutants
Authors:Li Zhijian  Vizeacoumar Franco J  Bahr Sondra  Li Jingjing  Warringer Jonas  Vizeacoumar Frederick S  Min Renqiang  Vandersluis Benjamin  Bellay Jeremy  Devit Michael  Fleming James A  Stephens Andrew  Haase Julian  Lin Zhen-Yuan  Baryshnikova Anastasia  Lu Hong  Yan Zhun  Jin Ke  Barker Sarah  Datti Alessandro  Giaever Guri  Nislow Corey  Bulawa Chris  Myers Chad L  Costanzo Michael  Gingras Anne-Claude  Zhang Zhaolei  Blomberg Anders  Bloom Kerry  Andrews Brenda  Boone Charles
Institution:Banting and Best Department of Medical Research, The Donnelly Centre, University of Toronto, Toronto, Ontario, Canada.
Abstract:Conditional temperature-sensitive (ts) mutations are valuable reagents for studying essential genes in the yeast Saccharomyces cerevisiae. We constructed 787 ts strains, covering 497 (~45%) of the 1,101 essential yeast genes, with ~30% of the genes represented by multiple alleles. All of the alleles are integrated into their native genomic locus in the S288C common reference strain and are linked to a kanMX selectable marker, allowing further genetic manipulation by synthetic genetic array (SGA)-based, high-throughput methods. We show two such manipulations: barcoding of 440 strains, which enables chemical-genetic suppression analysis, and the construction of arrays of strains carrying different fluorescent markers of subcellular structure, which enables quantitative analysis of phenotypes using high-content screening. Quantitative analysis of a GFP-tubulin marker identified roles for cohesin and condensin genes in spindle disassembly. This mutant collection should facilitate a wide range of systematic studies aimed at understanding the functions of essential genes.
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