Quantum mechanical hydrogen tunneling in bacterial copper amine oxidase reaction |
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Authors: | Murakawa Takeshi Okajima Toshihide Kuroda Shun'ichi Nakamoto Takuya Taki Masayasu Yamamoto Yukio Hayashi Hideyuki Tanizawa Katsuyuki |
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Affiliation: | Department of Structural Molecular Biology, Institute of Scientific and Industrial Research, Osaka University, Ibaraki, Osaka 567-0047, Japan. |
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Abstract: | A key step decisively affecting the catalytic efficiency of copper amine oxidase is stereospecific abstraction of substrate alpha-proton by a conserved Asp residue. We analyzed this step by pre-steady-state kinetics using a bacterial enzyme and stereospecifically deuterium-labeled substrates, 2-phenylethylamine and tyramine. A small and temperature-dependent kinetic isotope effect (KIE) was observed with 2-phenylethylamine, whereas a large and temperature-independent KIE was observed with tyramine in the alpha-proton abstraction step, showing that this step is driven by quantum mechanical hydrogen tunneling rather than the classical transition-state mechanism. Furthermore, an Arrhenius-type preexponential factor ratio approaching a transition-state value was obtained in the reaction of a mutant enzyme lacking the critical Asp. These results provide strong evidence for enzyme-enhanced hydrogen tunneling. X-ray crystallographic structures of the reaction intermediates revealed a small difference in the binding mode of distal parts of substrates, which would modulate hydrogen tunneling proceeding through either active or passive dynamics. |
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Keywords: | Quantum mechanical hydrogen tunneling Transition-state mechanism Copper amine oxidase Topa quinone Catalytic base X-ray crystal structure |
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