The crystal structure of Echinococcus granulosus fatty-acid-binding protein 1 |
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Authors: | Emma Jakobsson Gabriela Alvite Terese Bergfors Adriana Esteves Gerard J. Kleywegt |
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Affiliation: | 1. Department of Cell and Molecular Biology, Uppsala University, Biomedical Centre, Box 596, SE-751 24 Uppsala, Sweden;2. Biochemistry Section, Department of Cell and Molecular Biology, Faculty of Sciences, Universidad de la República, Iguá 4225, 11400 Montevideo, Uruguay |
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Abstract: | We describe the 1.6 Å crystal structure of the fatty-acid-binding protein EgFABP1 from the parasitic platyhelminth Echinococcus granulosus. E. granulosus causes hydatid disease, which is a major zoonosis. EgFABP1 has been implicated in the acquisition, storage, and transport of lipids, and may be important to the organism since it is incapable of synthesising most of its lipids de novo. Moreover, EgFABP1 is a promising candidate for a vaccine against hydatid disease.The crystal structure reveals that EgFABP1 has the expected 10-stranded β-barrel fold typical of the family of intracellular lipid-binding proteins, and that it is structurally most similar to P2 myelin protein. We describe the comparison of the crystal structure of EgFABP1 with these proteins and with an older homology model for EgFABP1.The electron density reveals the presence of a bound ligand inside the cavity, which we have interpreted as palmitic acid. The carboxylate group of the fatty acid interacts with the protein's P2 motif, consisting of a conserved triad R…R-x-Y. The hydrophobic tail of the ligand assumes a fairly flat, U-shaped conformation and has relatively few interactions with the protein.We discuss some of the structural implications of the crystal structure of EgFABP1 for related platyhelminthic FABPs. |
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Keywords: | Crystal structure Fatty-acid-binding protein Hydatid disease ALBP adipocyte lipid-binding protein BFABP brain fatty-acid-binding protein cRABP cellular retinoic-acid-binding protein cRBP cellular retinol-binding protein EFABP epidermal fatty-acid-binding protein FABP fatty-acid-binding protein IFABP intestinal fatty-acid-binding protein iLBP intracellular lipid-binding protein ILBP ileal lipid-binding protein LFABP liver fatty-acid-binding protein MFABP muscle fatty-acid-binding protein normalised RMSD for 100 aligned residues PDB Protein Data Bank RMSD root-mean-square distance or deviation |
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