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绝经对血液单核细胞基因表达谱的影响:基因芯片初步研究
引用本文:刘耀中,陆燕,沈汇,Joan M Lappe,雷署丰,Robert R Recker,邓红文.绝经对血液单核细胞基因表达谱的影响:基因芯片初步研究[J].遗传学报,2007,34(11):974-983.
作者姓名:刘耀中  陆燕  沈汇  Joan M Lappe  雷署丰  Robert R Recker  邓红文
作者单位:1. 湖南师范大学生命科学学院分子与统计遗传学研究室,长沙,410081;肯特州立大学生物科学系,肯特,俄亥俄州,44242,美国
2. 克瑞屯大学骨质疏松研究中心,奥马哈,内不拉斯加州,68131,美国;密苏里堪萨斯城大学医学院基础医学部,堪萨斯城,密苏里州,64108,美国
3. 克瑞屯大学骨质疏松研究中心,奥马哈,内不拉斯加州,68131,美国
4. 湖南师范大学生命科学学院分子与统计遗传学研究室,长沙 410081;密苏里堪萨斯城大学医学院基础医学部,堪萨斯城,密苏里州 64108,美国
5. 湖南师范大学生命科学学院分子与统计遗传学研究室,长沙 410081;克瑞屯大学骨质疏松研究中心,奥马哈,内不拉斯加州 68131,美国;密苏里堪萨斯城大学医学院基础医学部,堪萨斯城,密苏里州 64108,美国
摘    要:绝经是女性一生中很重要的生理现象之一,它能增加一系列复杂免疫、神经退化、新陈代谢和心血管方面的疾病。血液单核细胞能分化成各种各样的细胞,这些细胞在组织形态发生和免疫应答方面起着很重要的作用。本研究中采用了包含大约14,500个基因探针的Affymetrix Human U133A基因芯片来研究健康的绝经前和绝经后女性外周血液单核细胞中的基因表达谱。样本之间的对比分析表明有20个基因上调,20个基因下调。其中的28个基因根据它们的生物过程如细胞繁殖、免疫应答、细胞代谢等等被分成了6个主要的GO类别;剩下的12个基因其生物学功能还没有被鉴定。研究结果支持了我们的假设:血液单核细胞的功能状态确实受到绝经的影响,而且由此带来的改变可能是由全基因组范围的基因表达谱而决定的。本研究中鉴定的一些差异表达基因有可能作为以后研究与绝经相关的系统免疫、神经退化和心血管疾病的候选基因研究。此工作是这个研究方向的第一次尝试,为将来的进一步研究奠定了基础。

关 键 词:绝经  单核细胞  芯片  差异基因表达
修稿时间:2007-02-28

Effect of Menopause on Gene Expression Profiles of Circulating Monocytes: A Pilot in vivo Microarray Study
Volodymyr Dvornyk,Yaozhong Liu,Yan Lu,Hui Shen,Joan M Lappe,Shufeng Lei,Robert R Recker,Hongwen Deng.Effect of Menopause on Gene Expression Profiles of Circulating Monocytes: A Pilot in vivo Microarray Study[J].Journal of Genetics and Genomics,2007,34(11):974-983.
Authors:Volodymyr Dvornyk  Yaozhong Liu  Yan Lu  Hui Shen  Joan M Lappe  Shufeng Lei  Robert R Recker  Hongwen Deng
Institution:1. Laboratory of Molecular and Statistical Genetics, College of Life Sciences, Hunan Normal University, Changsha 410081, China; 2. Department of Biological Sciences, Kent State University, Kent, OH 44242, USA; 3. Osteoporosis Research Center, Creighton University Medical Center, Omaha, NE 68131, USA; 4. Departments of Basic Medical Science, School of Medicine, University of Missouri-Kansas City, Kansas City, MO 64108, USA
Abstract:Menopause is one of the key physiological events in the female life and can increase the risk for a number of complex autoimmune, neurodegenerative, metabolic, and cardiovascular disorders. Circulating monocytes can differentiate into various cell types and play an important role in tissue morphogenesis and immune response. We studied gene expression profiles of peripheral blood monocytes in healthy pre- and postmenopausal women using Affymetrix Human U133A GeneChip array that contains probes for -14,500 genes. Comparative analyses between the samples showed that 20 genes were up- and 20 were down-regulated. Of these genes, 28 were classified into six major GO categories relevant to such biological processes as the cell proliferation, immune response, cellular metabolism, and the others. The remaining 12 genes have yet unidentified biological functions. Our results support the hypothesis that functional state of circulating monocytes is indeed affected by menopause, and resulting changes may be determined through the genomewide gene expression profiling. Several differentially expressed genes identified in this study may be candidates for further studies of menopause-associated systemic autoimmune, neurodegenerative, and cardiovascular disorders. Our study is only the first attempt in this direction, but it lays a basis for further research.
Keywords:menopause  monocytes  microarrays  differential gene expression
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