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Rapid O serogroup identification of the ten most clinically relevant STECs by Luminex microbead-based suspension array
Authors:Lin Andrew  Nguyen Lam  Lee Teresa  Clotilde Laurie M  Kase Julie A  Son Insook  Carter J Mark  Lauzon Carol R
Institution:
  • a U.S. Food and Drug Administration San Francisco District Laboratory, 1431 Harbor Bay Parkway, Alameda, CA 94502, United States
  • b California State University, East Bay, Department of Biological Sciences, 25800 Carlos Bee Blvd., Hayward, CA 94542, United States
  • c U.S. Department of Agriculture, Agricultural Research Services, 800 Buchanan St., Albany, CA 94710, United States
  • d U.S. Food and Drug Administration, Center for Food Safety and Nutrition, 5100 Paint Branch Parkway, College Park, MD 20740, United States
  • Abstract:Identification and serotyping of Shiga toxin-producing Escherichia coli during foodborne outbreaks can aid in matching clinical, food, and environmental isolates when trying to identify the source of illness and ultimately food contamination. Herein we describe a Luminex microbead-based suspension array to identify the O serogroup of the ten most clinically relevant STECs: O26, O45, O91, O103, O111, O113, O121, O128, O145, and O157. The use of PCR followed by Luminex xMAP® technology enables the detection of multiple analytes in a single multiplex reaction with high throughput capabilities. One hundred and fourteen STEC isolates were correctly identified with no false positives among forty-six other organisms using this assay. Assay performance was tested in multiple laboratories using a panel of eleven different STEC serogroups on the Bio-Plex 200 and MAGPIX instruments. The STEC microbead-based suspension array can be performed in a 96-well plate format for high throughput screening in less than 4 h. Furthermore, it is expandable, allowing for the addition of O serogroups should the need arise.
    Keywords:STEC  O serogroup identification  Multi-plex PCR  Luminex
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