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Structural characterization of lipid A component of Erwinia carotovora lipopolysaccharide
Authors:Satoshi Fukuoka  Hiroshi Kamishima  Yoshinobu Nagawa  Hiroshi Nakanishi  Keiichiro Ishikawa  Yoshio Niwa  Eiichi Tamiya  Isao Karube
Institution:(1) Government Industrial Research Institute Shikoku, 2-3-3, Hananomiya-cho, 761 Takamatsu, Japan;(2) National Chemical Laboratory for Industry, 1-1, Higashi, 305 Tsukuba, Japan;(3) Research Center for Advanced Science and Technology, University of Tokyo, 4-6-1, Komaba, 153 Meguro-ku, Tokyo, Japan
Abstract:The chemical structure of the lipid A component of lipopolysaccharide excreted into the liquid medium by the plant pathogenic enterobacterium Erwinia carotovora FERM P-7576 was characterized. It consists of a beta-1prime, 6-linked glucosamine disaccharide which carries ester-and amide-bound fatty acids and phosphate similar to the lipid A from other gram-negative bacteria. The lipid A preparation was not uniform in the number and composition of the fatty acids linked to the disaccharide. Four prominent lipids A were involved, they were composed of five to seven residues of fatty acid. Among them the major component was hexa-acyl lipid A, in which the hydroxyl group at position 3prime and the amino group of the non-reducing glucosamine unit carry 3-dodecanoyl-oxytetradecanoyl residues. Positions 2 and 3 of the reducing glucosamine unit were substituted by 3-hydroxytetradecanoic acid. In the hepta-acyl lipid A, an additional hexadecanoic acid was linked to the hydroxyl group of the 3-hydroxytetradecanoyl residue at position 2 of the hexa-acyl lipid A. Two penta-acyl lipids A were the homologs of the hexa-acyl lipid A with decreasing acylation. Dodecanoic acid was missing from one, and 3-hydroxytetradecanoic acid from another. 3-Dodecanoyloxytetradecanoyl residue at position 3prime differentiates E. carotovora lipid A from that of other gram-negative bacteria.Abbreviations LPS lipopolysaccharide - GlcN glucosamine - KDO 3-deoxy-d-manno-octulosonic acid - FAB-MS fast atom bombardment mass spectrometry - u atomic mass unit
Keywords:Erwinia carotovora  Lipopolysaccharide  Lipid A structure  Component analysis  FAB-MS  2D-NMR
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