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Improvement of protein structure comparison using a structural alphabet
Authors:Joseph Agnel Praveen  Srinivasan N  de Brevern Alexandre G
Affiliation:a INSERM UMR-S 665, Dynamique des Structures et Interactions des Macromolécules Biologiques (DSIMB), 6, rue Alexandre Cabanel, 75739 Paris Cedex 15, France
b Université Paris Diderot - Paris 7, 6, rue Alexandre Cabanel, 75739 Paris Cedex 15, France
c Institut National de la Transfusion Sanguine (INTS), 6, rue Alexandre Cabanel, 75739 Paris Cedex 15, France
d Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560012, India
Abstract:
Keywords:Amino acid   Structural alphabet   Protein blocks   Semi-global alignment   Anchor-based alignment   Protein folds   Structural comparison   Protein structure mining   Protein data bank
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