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The SARS-coronavirus-host interactome: identification of cyclophilins as target for pan-coronavirus inhibitors
Authors:Pfefferle Susanne  Schöpf Julia  Kögl Manfred  Friedel Caroline C  Müller Marcel A  Carbajo-Lozoya Javier  Stellberger Thorsten  von Dall'Armi Ekatarina  Herzog Petra  Kallies Stefan  Niemeyer Daniela  Ditt Vanessa  Kuri Thomas  Züst Roland  Pumpor Ksenia  Hilgenfeld Rolf  Schwarz Frank  Zimmer Ralf  Steffen Imke  Weber Friedemann  Thiel Volker  Herrler Georg  Thiel Heinz-Jürgen  Schwegmann-Wessels Christel  Pöhlmann Stefan  Haas Jürgen  Drosten Christian  von Brunn Albrecht
Institution:Bernhard-Nocht-Institute, Hamburg, Germany.
Abstract:Coronaviruses (CoVs) are important human and animal pathogens that induce fatal respiratory, gastrointestinal and neurological disease. The outbreak of the severe acute respiratory syndrome (SARS) in 2002/2003 has demonstrated human vulnerability to (Coronavirus) CoV epidemics. Neither vaccines nor therapeutics are available against human and animal CoVs. Knowledge of host cell proteins that take part in pivotal virus-host interactions could define broad-spectrum antiviral targets. In this study, we used a systems biology approach employing a genome-wide yeast-two hybrid interaction screen to identify immunopilins (PPIA, PPIB, PPIH, PPIG, FKBP1A, FKBP1B) as interaction partners of the CoV non-structural protein 1 (Nsp1). These molecules modulate the Calcineurin/NFAT pathway that plays an important role in immune cell activation. Overexpression of NSP1 and infection with live SARS-CoV strongly increased signalling through the Calcineurin/NFAT pathway and enhanced the induction of interleukin 2, compatible with late-stage immunopathogenicity and long-term cytokine dysregulation as observed in severe SARS cases. Conversely, inhibition of cyclophilins by cyclosporine A (CspA) blocked the replication of CoVs of all genera, including SARS-CoV, human CoV-229E and -NL-63, feline CoV, as well as avian infectious bronchitis virus. Non-immunosuppressive derivatives of CspA might serve as broad-range CoV inhibitors applicable against emerging CoVs as well as ubiquitous pathogens of humans and livestock.
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