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The identification of a novel lead class for phosphodiesterase 2 inhibition by fragment-based drug design
Authors:Ashley B. Forster  Pravien Abeywickrema  Jaime Bunda  Christopher D. Cox  Tamara D. Cabalu  Melissa Egbertson  John Fay  Krista Getty  Dawn Hall  Maria Kornienko  Jun Lu  Gopal Parthasarathy  John Reid  Sujata Sharma  William D. Shipe  Sean M. Smith  Stephen Soisson  Shawn J. Stachel  Richard Berger
Affiliation:1. Discovery Chemistry, MRL, 770 Sumneytown Pike, West Point, PA 19486, USA;2. Target Protein Design, MRL, 770 Sumneytown Pike, West Point, PA 19486, USA;3. PPDM Preclinical ADME, MRL, 770 Sumneytown Pike, West Point, PA 19486, USA;4. Pharmacology, MRL, 770 Sumneytown Pike, West Point, PA 19486, USA;5. Assay Development, Protein Science, 770 Sumneytown Pike, MRL, West Point, PA 19486, USA;6. Structural Chemistry, MRL, 770 Sumneytown Pike, West Point, PA 19486, USA;7. Neuroscience, MRL, 770 Sumneytown Pike, West Point, PA 19486, USA;8. Chemical Modeling & Informatics, MRL, 770 Sumneytown Pike, West Point, PA 19486, USA
Abstract:
We have identified a novel PDE2 inhibitor series using fragment-based screening. Pyrazolopyrimidine fragment 1, while possessing weak potency (Ki?=?22.4?μM), exhibited good binding efficiencies (LBE?=?0.49, LLE?=?4.48) to serve as a start for structure-based drug design. With the assistance of molecular modeling and X-ray crystallography, this fragment was developed into a series of potent PDE2 inhibitors with good physicochemical properties. Compound 16, a PDE2 selective inhibitor, was identified that exhibited favorable rat pharmacokinetic properties.
Keywords:PDE2  Phosphodiesterase 2  Fragment-based screening  Structure-based drug design
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