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Hybrid physics-based and data-driven modeling for bioprocess online simulation and optimization
Authors:Dongda Zhang  Ehecatl Antonio Del Rio-Chanona  Panagiotis Petsagkourakis  Jonathan Wagner
Institution:1. Centre for Process Integration, The Mill, University of Manchester, Manchester, UK;2. Centre for Process Systems Engineering, South Kensington Campus, Imperial College London, London, UK;3. Centre for Process Integration, The Mill, University of Manchester, Manchester, UK

Centre for Process Systems Engineering, University College London, London, UK;4. Department of Chemical Engineering, Loughborough University, Loughborough, Leicestershire, UK

Abstract:Model-based online optimization has not been widely applied to bioprocesses due to the challenges of modeling complex biological behaviors, low-quality industrial measurements, and lack of visualization techniques for ongoing processes. This study proposes an innovative hybrid modeling framework which takes advantages of both physics-based and data-driven modeling for bioprocess online monitoring, prediction, and optimization. The framework initially generates high-quality data by correcting raw process measurements via a physics-based noise filter (a generally available simple kinetic model with high fitting but low predictive performance); then constructs a predictive data-driven model to identify optimal control actions and predict discrete future bioprocess behaviors. Continuous future process trajectories are subsequently visualized by re-fitting the simple kinetic model (soft sensor) using the data-driven model predicted discrete future data points, enabling the accurate monitoring of ongoing processes at any operating time. This framework was tested to maximize fed-batch microalgal lutein production by combining with different online optimization schemes and compared against the conventional open-loop optimization technique. The optimal results using the proposed framework were found to be comparable to the theoretically best production, demonstrating its high predictive and flexible capabilities as well as its potential for industrial application.
Keywords:bioprocess optimization  data recalibration  fed-batch operation  kinetic modeling  machine learning
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