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In silico strategies to couple production of bioethanol with growth in cyanobacteria
Authors:Romina Lasry Testa  Claudio Delpino  Vanina Estrada  Soledad M. Diaz
Affiliation:Planta Piloto de Ingeniería Química (PLAPIQUI), Universidad Nacional del Sur (UNS)-CONICET, Bahía Blanca, Argentina
Abstract:
Cyanobacteria have been considered as promising candidates for sustainable bioproduction from inexpensive raw materials, as they grow on light, carbon dioxide, and minimal inorganic nutrients. In this study, we present a genome-scale metabolic network model for Synechocystis sp. PCC 6803 and study the optimal design of the strain for ethanol production by using a mixed integer linear problem reformulation of a bilevel programming problem that identifies gene knockouts which lead to coupling between growth and product synthesis. Five mutants were found, where the in silico model predicts coupling between biomass growth and ethanol production in photoautotrophic conditions. The best mutant gives an in silico ethanol production of 1.054 mmol·gDW −1·h −1.
Keywords:bilevel programming  bioethanol  coupled mutant  cyanobacteria  genome-scale metabolic model  strain design
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