Relationships between biological soil crusts,bacterial diversity and abundance,and ecosystem functioning: Insights from a semi‐arid Mediterranean environment

Questions: To what degree do biological soil crusts (BSCs), which are regulators of the soil surface boundary, influence associated microbial communities? Are these associations important to ecosystem functioning in a Mediterranean semi‐arid environment? Location: Gypsum outcrops near Belmonte del Tajo, Central Spain. Methods: We sampled a total of 45 (50 cm × 50 cm) plots, where we estimated the cover of every lichen and BSC‐forming lichen species. We also collected soil samples to estimate bacterial species richness and abundance, and to assess different surrogates of ecosystem functioning. We used path analysis to evaluate the relationships between the richness/abundance of above‐ and below‐ground species and ecosystem functioning. Results: We found that the greatest direct effect upon the ecosystem function matrix was that of the biological soil crust (BSC) richness matrix. A few bacterial species were sensitive to the lichen community, with a disproportionate effect of Collema crispum and Toninia sedifolia compared to their low abundance and frequency. The lichens Fulgensia subbracteata and Toninia spp. also had negative effects on bacteria, while Diploschistes diacapsis consistently affected sensitive bacteria, sometimes positively. Despite these results, very few of the BSC effects on ecosystem function could be ascribed to changes within the bacterial community. Conclusion: Our results suggest the primary importance of the richness of BSC‐forming lichens as drivers of small‐scale changes in ecosystem functioning. This study provides valuable insights on semi‐arid ecosystems where plant cover is spatially discontinuous and ecosystem function in plant interspaces is regulated largely by BSCs.     

Why we should conserve ‘limiting factors’, at least sometimes!

Körner's recent paper provided an excellent initial discussion of the term ‘limitation’ in ecology. I accept most of his arguments but would argue that there are some circumstances in applied ecology where the concept of limitation can be useful; these are (1) where there is a deficiency of a factor that prevents growth, and (2) where there is a need to manage an ecosystem so that a limitation is enforced.     

Competing Risks and Time‐Dependent Covariates

Time‐dependent covariates are frequently encountered in regression analysis for event history data and competing risks. They are often essential predictors, which cannot be substituted by time‐fixed covariates. This study briefly recalls the different types of time‐dependent covariates, as classified by Kalbfleisch and Prentice [The Statistical Analysis of Failure Time Data, Wiley, New York, 2002] with the intent of clarifying their role and emphasizing the limitations in standard survival models and in the competing risks setting. If random (internal) time‐dependent covariates are to be included in the modeling process, then it is still possible to estimate cause‐specific hazards but prediction of the cumulative incidences and survival probabilities based on these is no longer feasible. This article aims at providing some possible strategies for dealing with these prediction problems. In a multi‐state framework, a first approach uses internal covariates to define additional (intermediate) transient states in the competing risks model. Another approach is to apply the landmark analysis as described by van Houwelingen [Scandinavian Journal of Statistics 2007, 34 , 70–85] in order to study cumulative incidences at different subintervals of the entire study period. The final strategy is to extend the competing risks model by considering all the possible combinations between internal covariate levels and cause‐specific events as final states. In all of those proposals, it is possible to estimate the changes/differences of the cumulative risks associated with simple internal covariates. An illustrative example based on bone marrow transplant data is presented in order to compare the different methods.     

Species‐specific disturbance tolerance,competition and positive interactions along an anthropogenic disturbance gradient

Question: As it has been found that stress promotes positive interactions mediated by physical amelioration of the environment, is it possible that interactions may turn positive with increasing chronic anthropogenic disturbance (CAD) intensity? Also, is it possible that species that do not tolerate disturbance may require environmental amelioration by their neighbours in disturbed areas, whereas tolerant species may not? Location: The semi‐arid grassland in Concepción Buenavista, Oaxaca, southern Mexico. Methods: We assessed interaction intensity and importance through a neighbour removal experiment along a CAD gradient for three species differing in disturbance tolerance. Water potential was monitored on vegetated and bare soil. Results: A shift from competitive effects in low CAD sites to positive interactions in degraded sites was found. The disturbance‐tolerant species did not respond to CAD, whereas the less tolerant species changed its interactions drastically in terms of growth and reproduction. The species with medium tolerance had an intermediate response. Neighbours promoted germination in all species. Vegetation removal reduced soil humidity. Conclusions: Positive interactions seemingly resulted from the amelioration of the abiotic stresses induced by vegetation removal. The dependence on neighbours to germinate, grow, or reproduce suggests that if CAD eliminates the plant cover, vegetation will hardly recover. Irreversible changes are known to occur in communities where positive interactions predominate, but CAD may set the conditions for irreversible shifts even in communities where interactions are normally competitive.     

覆膜对春小麦农田微生物数量和土壤养分的影响

研究了黄绵土区不同覆膜时期对旱作麦田土壤微生物数量及其与土壤碳、氮、磷含量的关系。丰水的 1 999年 ,土壤微生物数量增长早 ,延续时间长 ,覆膜 60 d微生物数量最高 (3 3 .93 8× 1 0 6 /g dry soil) ,其次为全程覆膜 (3 2 .2 5 9× 1 0 6 ) ;干旱的 2 0 0 0年微生物平均数量只有 1 999年的 3 6.5 % ,在后期有一定降水后微生物数量才出现高峰 ,以全程覆膜数量最高(1 4.83 6× 1 0 6 ) ,覆膜 60 d次之 (1 1 .5 2 9× 1 0 6 )。 1 999年各类群微生物数量同土壤有机碳之间均呈显著或极显著负相关。2 0 0 0年相关系数几乎全面下降 ,氨化细菌、硝化细菌和反硝化细菌 ,甚至微生物总量同土壤有机碳之间都已不再显著相关。 1 999年土壤全氮同氨化细菌、硝化细菌、亚硝化细菌、解磷细菌及微生物总量均呈显著或极显著负相关 ,2 0 0 0年只与氨化细菌、亚硝化细菌、微生物总数显著负相关。土壤速效磷含量在 1 999年与解磷细菌显著负相关 ,而在 2 0 0 0年相关已不再显著。两年试验结束后 ,全程覆膜处理有机质下降 2 1 .2 % ,覆膜 60 d处理下降 1 7.2 % ,覆膜 3 0 d和不覆膜处理下降相对较小 (4 .3 %和 6.7% )。由于施用化肥 ,土壤全氮有明显升高。速效磷在 1 999生长季和随后的休闲期都有升高 ,在干旱的 2 0 0 0     

Species introduction through seeds from an old,species‐rich hay meadow: Effects of management

Abstract. A local seed mixture from plants growing in a species‐rich, traditionally managed hay meadow site at Varaldsoy, Hardanger, western Norway, where many endangered hay meadow species of the region are growing, was sown in a newly harrowed experimental field 1 km from the source meadow in order to increase the habitat area for the endangered species. Of 25 endangered species recorded in the source meadow, only one (Holcus lanatus) was present in the target meadow. After sowing, 16 of the endangered species in addition to Holcus lanatus were recorded in the new site. Six species were only present in sown plots and seven others were more frequent there, while three species might have arrived by chance or originated from the seed bank. Replacing the traditional management regime, including one late cut and grazing in spring and in autumn, with three cutting times and the creation of gaps in the sward, resulted in a higher number of endangered species in plots which were only cut, possibly because the grazing was too intensive in the small enclosures.     

内蒙古库布齐沙地四种啮齿动物非颤拌性产热的季节变化

为了解非颤抖性产热在内陆荒漠小型哺乳动物适应性热能调节中的作用,1997年对库布齐荒漠沙地环境4种啮齿动物：三趾跳鼠（Dipus sagitta)、子午沙鼠（Meriones meridianus)、小毛足鼠（Phodopus roborovskii)和黑线仓鼠（Cricetulus barabensis)的非颤抖性产热季节变化进行了测定。4种动物的非颤抖性产热在秋季低温刺激下明显高于夏季,而且小毛足鼠和黑线仓鼠在秋季的最大非颤抖性产热分别高于春季14％和35％。典型荒漠种小毛足鼠的季节变化最明显,夏季最低。结果表明,生活在内陆干旱地区的动物生长期进化过程中,发展了良好的非颤抖性产热体温调节机制适应环境温度的季节变化。