The factor structure of horse personality

Abstract

Two hundred and ten owners or carers completed a specially modified version of the NEO-Personality Inventory-Five Factor Inventory (NEO-PI-FFI, a well established personality questionnaire for humans) for their chosen horse. Three and five-factor Principal Components Analysis (PCA) solutions are reported and compared with published studies on the factor structure of human personality. Participants were asked how confident they were in using each of the different Big Five scales in describing their horse: neuroticism and extraversion were rated with most confidence and openness to experience with least confidence. Taking both our own factors above and the NEO scales, some comparisons between the working roles of the horse were significant; for example, horses used for teaching were less extraverted than show jumpers. Sophistication of working role also related to personality; for example, international horses were less extraverted than novices. We conclude that the study provides some evidence for cross-species similarity in the structure of personality.     

Potato purple top phytoplasma‐induced disruption of gibberellin homeostasis in tomato plants

Phytoplasmas are phloem‐inhabiting, cell wall‐less bacteria that cause numerous plant diseases worldwide. Plants infected by phytoplasmas often exhibit various symptoms indicative of hormonal imbalance. In this study, we investigated the effects of potato purple top (PPT) phytoplasma infection on gibberellin homeostasis in tomato plants. We found that PPT phytoplasma infection caused a significant reduction in endogenous levels of gibberellic acid (GA₃). The decrease in GA₃ content in diseased plants was correlated with down regulation of genes responsible for biosynthesis of bioactive GAs ( GA20ox1 and GA3ox1) and genes involved in formation of GA precursors [geranyl diphosphate synthase (GPS) and copalyldiphosphate synthase (CPS)]. Exogenous application of GA₃ at 200 µmol L^?1 was able to restore the GA content in infected plants to levels comparable to those in healthy controls, and to attenuate the characteristic ‘big bud’ symptoms induced by the phytoplasma. The interesting observation that PPT phytoplasma‐infected plants had prolonged low expression of key GA biosynthesis genes GA20ox1 and GA3ox1 under GA deficiency conditions led us to hypothesise that there was a diminished sensitivity of the GA metabolism feedback regulation, especially GA biosynthesis negative feedback regulation, in those affected plants, and such diminished sensitization in early stages of infection may represent a central element of the phytoplasma‐induced disruption of GA homeostasis and pathogenesis.     

What determines attitude of local people towards tiger and leopard in Nepal?

Understanding attitude of local people towards big cats is vital for conservation interventions to succeed. Taking tigers and leopards as focal species, we investigated local peoples' attitude towards four subjects—tiger, tiger conservation, leopard, and leopard conservation—considering demographic and socio-economic factors as well as past experience with such predators in Nepal's first national park and a world heritage site, Chitwan National Park. The data were collected from 414 local people using structured questionnaires and their attitude towards the four subjects determined. We performed ordinal logistic regression analysis to identify the best fitted model and significant variables affecting attitudes. While majority of the people (51%) strongly liked tigers, fewer people (38%) had similar view while it came to leopard. However, a greater proportion of people strongly agreed that the conservation of tigers (61%) and leopards (53%) is important. About 12% people had negative attitude towards both big cats. We found women and low income respondents to likely have negative attitudes and higher caste Hindus to have positive attitudes towards both big cats and their conservation. Better educated persons and the owners to larger herds of livestock only agreed on conservation of tiger but not leopard. Past experience with the predator negatively affected attitude towards tiger but not leopard. We suggest the identified cohort of people with negative attitudes be more targeted in conservation initiatives. The reasons behind the similarities and differences in peoples’ attitudes are discussed and designation of species-specific programmes for both cats is recommended.     

Centipede (Chilopoda) richness and diversity in the Bug River valley (Eastern Poland)

The main aim of the survey was to describe the diversity and richness of Chilopoda in the selected area of the Bug River valley. The study sites were located in two regions differing in the shape of the valley, the presence of thermophilous habitats and the size of riparian forests. Pitfall traps were used as a sampling method. As a result, 444 specimens belonging to 12 centipede species of two orders – Geophilomorpha (four species) and Lithobiomorpha (eight species) were caught. Lithobius (Monotarsobius) curtipes C.L.Koch, 1847, Pachymerium ferrugineum (C.L.Koch, 1835), Lamyctes (Lamyctes) emarginatus (Newport, 1844) and Lithobius (Monotarsobius) dudichi Loksa, 1947 were the most common and the most numerous species. Of particular note is Lithobius dudichi found in Poland for the first time and previously known based on a single specimen. Two to 10 Chilopoda species were found in each habitat under investigation. The greatest species richness was found in thermophilous thickets (10 species), sandy grasslands (eight), xerothermic grasslands (eight) and mesic meadows (six). The fewest number of species (two) was found in rushes at oxbows and in wet meadows. We found differences in the species composition and the number of Chilopoda between the lower (102 specimens, six species) and the middle (324 specimens, 11 species) section of the river valley. Our results confirm the need to protect xerothermic habitats, unique almost throughout entire Central Europe, which due to their distribution and their small area covered are fairly easily subject to the process of destruction.     

抑制性频谱整合对大棕蝠下丘神经元声强敏感性的影响

自由声场条件下 ,采用特定双声刺激方法研究了不同频率通道之间的非线性整合对下丘神经元声强敏感性的调制作用。实验在 1 2只麻醉与镇定的大棕蝠 (Eptesicusfuscus)上进行 ,双电极同步记录 2个配对神经元的声反应动作电位。主要结果如下 :1 )所获 1 1 0个 (5 5对 )配对神经元中 ,85 5 %表现为抑制性频谱整合作用 ,其余 1 4 5 %为易化性频谱整合 ;2 )阈上 1 0dB (SPL)放电率抑制百分比与神经元最佳频率 (BF)及记录深度呈负相关 ;3)抑制效率随声刺激强度升高而逐步下降 ;4 )当掩蔽声分别位于神经元兴奋性频率调谐曲线(FTC)内 (MSin) /外 (MSout)时 ,其抑制效率存在差异。前者的放电率抑制百分比及声反应动力学范围(DR)下降百分比均显著高于后者 ;5 )抑制性频谱整合导致 3类DR改变 :6 1 6 %为下降、 1 0 9%增加、另有2 7 5 %变化小于 1 0 %。本结果进一步支持如下设想 :下丘不同频率通道之间的抑制性频谱整合参与了对强度编码的主动神经调制活动     

Drosophila big brain does not act as a water channel, but mediates cell adhesion

The neurogenic gene Drosophilabig brain (bib) has a high sequence homology to aquaporin-4. However, its cellular functions in Drosophila neurogenesis have remained elusive. Here we investigated cell adhesion, and the ion and water permeability of Bib. The adhesive function was examined by a cell aggregation assay using L cells. Bib-transfected L cells formed aggregated clusters, while control-L cells remained as a single cell suspension. Ion permeation was not confirmed in L cells stably expressing Bib. When expressed in COS7 cells, Bib exhibited limited water permeability. This newly found cell adhesive function of Bib may be important for Drosophila neurogenesis.     

北京房山大足鼠耳蝠食鱼性及回声定位信号

大足鼠耳蝠 (Myotisricketti)具有食鱼蝙蝠的形态特征 ,但食鱼习性待考。以北京房山种群为对象 ,夜间在洞口悬挂雾网 ,捕获取食返洞大足鼠耳蝠共 18只 ,胃检发现 7例全为鱼类 (宽鳍 ,鲫鱼和洛氏 ) ,10例以鱼类为主 ,仅 1例全为昆虫。室内实验观察到捕鱼行为 2 5 6次 ,成功率 12 5 %。如此 ,该种具食鱼习性的猜测得到证实。回声定位信号属调频型 ,扫频范围从 6 7 4 0kHz到 2 3 6 3kHz ,主频 (38 2 1± 1 18)kHz ,声信号时程 (2 5 8± 0 34)ms。这些特征具有一定的物种特异性     

A novel approach for multi-domain and multi-gene family identification provides insights into evolutionary dynamics of disease resistance genes in core eudicot plants

Background

Recent advances in DNA sequencing techniques resulted in more than forty sequenced plant genomes representing a diverse set of taxa of agricultural, energy, medicinal and ecological importance. However, gene family curation is often only inferred from DNA sequence homology and lacks insights into evolutionary processes contributing to gene family dynamics. In a comparative genomics framework, we integrated multiple lines of evidence provided by gene synteny, sequence homology and protein-based Hidden Markov Modelling to extract homologous super-clusters composed of multi-domain resistance (R)-proteins of the NB-LRR type (for NUCLEOTIDE BINDING/LEUCINE-RICH REPEATS), that are involved in plant innate immunity.

Results

To assess the diversity of R-proteins within and between species, we screened twelve eudicot plant genomes including six major crops and found a total of 2,363 NB-LRR genes. Our curated R-proteins set shows a 50% average for tandem duplicates and a 22% fraction of gene copies retained from ancient polyploidy events (ohnologs). We provide evidence for strong positive selection and show significant differences in molecular evolution rates (Ka/Ks-ratio) among tandem- (mean = 1.59), ohnolog (mean = 1.36) and singleton (mean = 1.22) R-gene duplicates. To foster the process of gene-edited plant breeding, we report species-specific presence/absence of all 140 NB-LRR genes present in the model plant Arabidopsis and describe four distinct clusters of NB-LRR “gatekeeper” loci sharing syntenic orthologs across all analyzed genomes.

Conclusion

By curating a near-complete set of multi-domain R-protein clusters in an eudicot-wide scale, our analysis offers significant insight into evolutionary dynamics underlying diversification of the plant innate immune system. Furthermore, our methods provide a blueprint for future efforts to identify and more rapidly clone functional NB-LRR genes from any plant species.

Electronic supplementary material

The online version of this article (doi:10.1186/1471-2164-15-966) contains supplementary material, which is available to authorized users.     

大铃棉中棉所48主要经济性状的QTL定位分析

利用4961对SSR引物对中棉所48的2个亲本进行多态性筛选,结果筛选到71对条带清晰、稳定性好的多态性引物,利用这些引物对261个F2群体进行扩增构建连锁图,获得了包含有49个标记位点的14个连锁群,共覆盖498.7cM,约占棉花总基因组10.0％的遗传图谱.采用WinQTL Cartographer 2.5的复合区间作图法(CIM),对F2群体的铃重、衣分及纤维品质进行分析,共检测到l1个稳定的QTLs,其中铃重2个、表分4个、纤维整齐度2个、纤维细度2个、纤维伸长率1个.这些稳定表达的QTLs能解释较大的表型变异,可用于纤维品质及产量性状的标记辅助选择,也可为大铃、优质棉的分子标记辅助选择,改良、提高大铃基因的选择效率,提供理论依据.