Development of species-specific primers for rapid identification by PCR of the ecologically important pathogen Fusarium keratoplasticum from isolated and environmental samples

The genus Fusarium contains many fungal species known to be pathogenic to animals and plants alike. One species complex within this genus, the Fusarium solani species complex (FSSC), is of particular concern due to its high numbers of pathogenic members. FSSC members are known to contribute significantly to plant, human and other animal fungal disease. One member of the FSSC, Fusarium keratoplasticum, is of particular ecological concern and has been implicated in low hatching success of endangered sea turtle eggs, as well as contribute to human and other animal Fusarium pathogenesis. Species-specific primers for molecular identification of F. keratoplasticum currently do not exist to our knowledge, making rapid identification, tracking and quantitation of this pathogenic fungus difficult. The objective of this study was to develop primers specific to F. keratoplasticum that could be applied to DNA from isolated cultures as well as total (mixed) DNA from environmental samples. RPB2 sequence from 109 Fusarium isolates was aligned and analysed to determine nucleotide polymorphisms specific to F. keratoplasticum useful for primer design. A set of primers were generated and found to be effective for identification of F. keratoplasticum from total DNA extracted from sand surrounding sea turtle nesting sites.     

Automated Food-Procuring Movement-Related Neuronal Activity in the Basolateral Amygdala of the Rat

We studied the impulse activity of neurons of the basal and lateral amygdalar nuclei generated when experimental animals (rats) performed fast stereotyped food-procuring movements by the forelimb. Within the basolateral amygdala, there are neurons whose activity is related to different stages of getting off the food, and according to the characteristics of their spiking these neurons should be divided into a number of subpopulations. Activation forestalling the movement initiation by 0.5-1.0 sec was observed in most neurons of the basolateral amygdala; this is considered a manifestation of excitation related to a motivation component of the food-procuring behavior. Activation of amygdalar neurons following movement initiation can result from generation in this structure of additional excitation necessary for successful performance of a complete food-procuring motor cycle.     

Optimization of speed and accuracy of decoding in translation

The speed and accuracy of protein synthesis are fundamental parameters for understanding the fitness of living cells, the quality control of translation, and the evolution of ribosomes. In this study, we analyse the speed and accuracy of the decoding step under conditions reproducing the high speed of translation in vivo. We show that error frequency is close to 10⁻³, consistent with the values measured in vivo. Selectivity is predominantly due to the differences in k_cat values for cognate and near-cognate reactions, whereas the intrinsic affinity differences are not used for tRNA discrimination. Thus, the ribosome seems to be optimized towards high speed of translation at the cost of fidelity. Competition with near- and non-cognate ternary complexes reduces the rate of GTP hydrolysis in the cognate ternary complex, but does not appreciably affect the rate-limiting tRNA accommodation step. The GTP hydrolysis step is crucial for the optimization of both the speed and accuracy, which explains the necessity for the trade-off between the two fundamental parameters of translation.     

Don C. Ohadike: The Man, his Intellectual Legacy and African Historiography

It is difficult to completely understand the life history of an intellectual excluding an understanding of his family upbringing and formative years. Family upbringing and childhood environment, often the less known part of a life history, play crucial roles in shaping the ideas and values individuals espouse in their adult life. Notwithstanding, this paper is not concerned with Don C. Ohadike’s childhood. It rather focuses on the professional career of our able historian – that is the part of his life as revealed by his most outstanding published writings. Ohadike’s published works contain a wellspring of idioms that tell much about his values, quality of mind, and his mission as an African historian. Ohadike was a humanist, an African patriot, and a nationalist crusader. His entire philosophy centered on safeguarding his African identity in an emergent world of cultural imperialism. The funds for this research were provided by a NEH-funded fellowship at the Schomburg Center, New York in the Spring of 2007. I owe a lot of gratitude to Professor John McLeod and Dean Blaine Hudson for granting me the extra incentives to pursue my research in New York. While all errors and misinterpretations are mine, I wish to thank the editors and anonymous reviewers for Journal of Dialectical Anthropology for their perspective comments and suggestions on earlier drafts of this paper.     

云南山楂茎尖的离体培养及其无性系快速繁殖

用云南山楂(Crataegus scabrifolia(Franch.)Rehd.)成年树茎尖和实生芽两种不同发育阶段的材料为外殖体,诱导它们休眠芽萌动,丛生芽条并诱导芽条生根。实验结果如下:1.以成年态的云南山楂侧芽为外植体,培养在附加IAA 0.1—0.5mg/l+6-BA 1-2mg/l的MS培养基上可诱导芽的萌发;将芽继代培养在附加0.5—1mg/l 6-BA的SH或MS培养基上,40天后芽数增殖4—6倍;将芽条截下置于1/2MS培养基上,附加不同浓度的IAA或IBA,可得到50—80％的生根率。2.以实生芽为外殖体,在相同条件下,则20天后芽数增殖便可获4—6倍;98％以上生根。结果表明:云南山楂的幼年态要比成年态易脱分化和再分化。     

Loading patterns and jaw movements during mastication in Macaca fascicularis: a bone-strain, electromyographic, and cineradiographic analysis

Rosette strain gage, electromyography (EMG), and cineradiographic techniques were used to analyze loading patterns and jaw movements during mastication in Macaca fascicularis. The cineradiographic data indicate that macaques generally swallow frequently throughout a chewing sequence, and these swallows are intercalated into a chewing cycle towards the end of a power stroke. The bone strain and jaw movement data indicate that during vigorous mastication the transition between fast close and the power stroke is correlated with a sharp increase in masticatory force, and they also show that in most instances the jaws of macaques are maximally loaded prior to maximum intercuspation, i.e. during phase I (buccal phase) occlusal movements. Moreover, these data indicate that loads during phase II (lingual phase) occlusal movements are ordinarily relatively small. The bone strain data also suggest that the duration of unloading of the jaw during the power stroke of mastication is largely a function of the relaxation time of the jaw adductors. This interpretation is based on the finding that the duration from 100% peak strain to 50% peak strain during unloading closely approximates the half-relaxation time of whole adductor jaw muscles of macaques. The EMG data of the masseter and medial pterygoid muscles have important implications for understanding both the biomechanics of the power stroke and the external forces responsible for the "wishboning" effect that takes place along the mandibular symphysis and corpus during the power stroke of mastication. Although both medial pterygoid muscles reach maximum EMG activity during the power stroke, the activity of the working-side medial pterygoid peaks after the balancing-side medial pterygoid. Associated with the simultaneous increase of force of the working-side medial pterygoid and the decrease of force of the balancing-side medial pterygoid is the persistently high level of EMG activity of the balancing-side deep masseter (posterior portion). This pattern is of considerable significance because the direction of force of both the working-side medial pterygoid and the balancing-side deep masseter are well aligned to aid in driving the working-side lower molars across the upper molars in the medial direction during unilateral mastication.(ABSTRACT TRUNCATED AT 400 WORDS)     

Movements of some indigenous riverine fish in Sri Lanka

The migratory movements of reproductive potamodromus fish established in man-made tropical lakes in the dry zone of Sri Lanka were determined. It was shown that the nine indigenous riverine species do not spawn in these lakes but move into the upstream channels when sexually mature. The pattern of upstream movement was found to be species-specific although most species showed a diurnal periodicity. It is suggested that the development of totally lacustrine forms of riverine species is very unlikely to occur in the man-made lakes of Sri Lanka because of their relatively short duration time.     

Gleichgewichtsbewegungen von Blättern als Reaktion auf asymmetrische Belastung — Isoklinotropismus nach Härdtl (1927) — und ihre Beziehung zum Gravitropismus

1. Die anscheinend in Vergessenheit geratenen älteren Angaben von HÄRDTL (1927 und spärer) und PRINGSHEIM (1931), nach denen einseitig belastete Blätter Gleichgewichtsbewegungen ausführen können (Isoklinotropismus nach HÄRDTL), wurden an mehreren Arten (Chelidonium majus, Aegopodium podagra ria, Ranunculus repens, Sambucus nigra, Coleus blumei und Hibiscus rosa sinensis) bestätigt,— Die einseitige Belastung erfolgte durch Einstecken von Nadeln in die eine Hälfte der Blattspreite bzw. in eine Blattfieder. 2. Bei Blättern, die in Spreite oder Stiel epinastisch gekrtimmt sind (die überwiegende Mehrzahl) oder auch durch die Belastung abwärts gebogen sind, kommt es dabei zu zwei verschiedenen Reaktionen: a) zu einer sofort eintretenden rein physikalischen reversiblen Reaktion, da die einseitige Last eine Torsion der Spreite bewirkt, die die Spreitenspitze nach der der Last gegenüberliegenden Seite [führt, und b) zu einer spärer eintretenden physiologischen Reaktion durch eine Wachstumskrümmung nach derselben Seite, - Beide Komponenten der Bewegung ftihren zu einer Verringerung oder einem Ausgleich des Ungleichgewichtes. 3. Die physiologische Reaktion war meist nach einem oder einigen Tagen erkennbar, bei Chelidonium mitunter schon nach einigen Stunden, bei Hibiscus gelegentlich erst nach etwa einer Woche. Mitunter blieb die Reaktion auch aus. Bei den gefiederten Blattern erfolgte sie in der Rhachis, ober- und unterhalb der belasteten Fieder, mitunter auch im Blattstiel, bei Coleus im Spreitengrund und im Blattstiel, bei Hibiscus im oberen Gelenkpolster (“Sekundargelenk”) des Blattstiels. Auch ältere Blätter reagierten oft noch überraschend gut. Vielfach führte die physiologische Reaktion zu einer vollständigen Ausbalancierung der einseitig belasteten Blattspreite. Auf nachtragliche Entfernung der eingesteckten Nadeln gingen auch die Krtimmungen in 2–3 Tagen wieder weitgehend zurück. 4. Als Ursache ftir die Gleichgewichtsbewegungen der Blätter kommen zwei verschiedene Mechanismen in Betracht: a) Infolge der durch die einseitige Belastung hervorgerufenen Schräglage der Blattspreite sammelt sich das Auxin auf der tiefer liegenden Flanke von Mittelnerv bzw. Rhachis und Blattstiel an, was zu einem stärkeren Wachstum dieser Seite und einer Gleichgewichtskrümmung führen muß. Nach dieser Auffassung ordnet sich der Isoklinotropismus dem Gravitropismus ein. b) Die nach der Belastung sofort eintretende auf der Torsionsspannung beruhende rein physikalische und zunächst reversible Gleichgewichtsreaktion des Blattes wird nach einigen Stunden oder Tagen teilweise irreversibel. (Für die spannungsfreien Abschnitte der Rhachis eines gefiederten Blattes oberhalb der Belastung kann diese Erklärung natürlich nicht gelten). Vermutlich sind beide Mechanismen, vor allern wohl der erstgenannte, bei den einzelnen Arten in verschiedenem Maße, als Ursache der Gleichgewichtsbewegungen wirksam. 5. Der biologische Sinn der Ausbalancierung eines (größeren) Blattes (PRINGSHELM 1931, HÄRDTL 1927, 1937 a) liegt darin, daß a) ein ausbalanciertes Blatt den geringsten Aufwand an mechanischen Elementen erfordert, und b) Photo- und Gravitropismus nur ein ausbalanciertes Blatt ohne Komplikationen in die angestrebte Lage fuhren konnen.