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1.
Klára Grantz ?a?ková Milan Ko?í?ek Kirsten Stray Dorien de Jong Pavlína ?ezá?ová Ji?í Brynda Noortje M. van Maarseveen Monique Nijhuis Tomá? Cihlá? Jan Konvalinka 《Journal of virology》2014,88(6):3586-3590
Insertions in the protease (PR) region of human immunodeficiency virus (HIV) represent an interesting mechanism of antiviral resistance against HIV PR inhibitors (PIs). Here, we demonstrate the improved ability of a phosphonate-containing experimental HIV PI, GS-8374, relative to that of other PIs, to effectively inhibit patient-derived recombinant HIV strains bearing PR insertions and numerous other mutations. We correlate enzyme inhibition with the catalytic activities of corresponding recombinant PRs in vitro and provide a biochemical and structural analysis of the PR-inhibitor complex. 相似文献
2.
Marcelo Leandro Bueno Vanessa Leite Rezende Vanessa Pontara Ary Teixeira de Oliveira-Filho 《Plant Ecology》2017,218(10):1171-1186
The Paraguayan territory and region, in the centre of South America, is a huge transition area with a succession of various vegetation types. However, this area has received little attention from researchers, with few works published on its flora and its delimitations. We aimed to identify the most important environmental driving forces and delimit floristic patterns in this region, since understanding the forces that drive floristic variations in this ecotonal region could help comprehend the distribution of vegetation not only in this region but throughout South America. We obtained 1234 tree species occurrence records, 205 geographic coordinates and 23 environmental variables and altitude from the ‘NeoTropTree’ database and verified the influence and contribution of environmental factors through variance partition. We tested the floristic consistency of the different vegetation types using dendrogram, indicator species and ordination analyses. We also constructed multiple linear models to check the correlation between species distribution and environmental variables. We found eight consistent vegetation types. The spatial variables coupled with environmental variables were more important than individual environmental or spatial variables. Among the environmental variables, the aridity index was the most important. Despite the importance of spatial factors, due to environmental heterogeneity, we found a gradient related to climate and edaphic variables related to tree flora. The results confirm that the Paraguayan territory and region can be considered to be a diversified and important ecotone area in South America with respect to tree flora. 相似文献
3.
Kazunari Kaizu Wiet de?Ronde Joris Paijmans Koichi Takahashi Filipe Tostevin Pieter?Rein ten?Wolde 《Biophysical journal》2014,106(4):976-985
Biological systems often have to measure extremely low concentrations of chemicals with high precision. When dealing with such small numbers of molecules, the inevitable randomness of physical transport processes and binding reactions will limit the precision with which measurements can be made. An important question is what the lower bound on the noise would be in such measurements. Using the theory of diffusion-influenced reactions, we derive an analytical expression for the precision of concentration estimates that are obtained by monitoring the state of a receptor to which a diffusing ligand can bind. The variance in the estimate consists of two terms, one resulting from the intrinsic binding kinetics and the other from the diffusive arrival of ligand at the receptor. The latter term is identical to the fundamental limit derived by Berg and Purcell (Biophys. J., 1977), but disagrees with a more recent expression by Bialek and Setayeshgar. Comparing the theoretical predictions against results from particle-based simulations confirms the accuracy of the resulting expression and reaffirms the fundamental limit established by Berg and Purcell. 相似文献
4.
5.
Elisa V. Bertini Carlos G. Nieto Peñalver Ana C. Leguina Verónica P. Irazusta Lucía I. C. de Figueroa 《Antonie van Leeuwenhoek》2014,106(3):497-506
The endophytic bacterium Gluconacetobacter diazotrophicus colonizes a broad range of host plants. Its plant growth-promoting capability is related to the capacity to perform biological nitrogen fixation, the biosynthesis of siderophores, antimicrobial substances and the solubilization of mineral nutrients. Colonization of and survival in these endophytic niche requires a complex regulatory network. Among these, quorum sensing systems (QS) are signaling mechanisms involved in the control of several genes related to microbial interactions, host colonization and stress survival. G. diazotrophicus PAL5 possesses a QS composed of a luxR and a luxI homolog, and produces eight molecules from the AHL family as QS signals. In this report data are provided showing that glucose concentration modifies the relative levels of these signal molecules. The activity of G. diazotrophicus PAL5 QS is also altered in presence of other carbon sources and under saline stress conditions. Inactivation of the QS system of G. diazotrophicus PAL5 by means of a quorum quenching strategy allowed the identification of extracellular and intracellular proteins under the control of this regulatory mechanism. 相似文献
6.
B. Rivero-Gutiérrez A. Anzola O. Martínez-Augustin F. Sánchez de Medina 《Analytical biochemistry》2014
It is currently a routine practice to require a measurement of a housekeeping reference, including actin, glyceraldehyde-3-phosphate dehydrogenase, β-tubulin, among others, in Western blots, as it is the rule in RNA blots. Reversible Ponceau staining has been applied successfully to check equal loading of gels. Here we test a new technique, with the Stain-Free gels from Bio-Rad, against both Ponceau staining and housekeeping protein immunodetection under different conditions. Our results show that Stain-Free gels outperform Ponceau staining and that both are more consistent than housekeeping proteins as a loading control. 相似文献
7.
N. W. E. van den Berg J. Neefs W. R. Berger S. W. E. Baalman E. Meulendijks M. Kawasaki E. M. Kemper F. R. Piersma M. W. Veldkamp R. Wesselink S. P. J. Krul J. R. de Groot 《Netherlands heart journal》2017,25(12):664-668
Background
Monosodium glutamate (MSG), also referred to as Vetsin or E621, is a flavour enhancer frequently used in Asian cuisine and abundantly present in the famous Chinese dish Peking duck. MSG is notorious for triggering the onset of the so-called ‘Chinese restaurant syndrome’ (CRS), a complex of unpleasant symptoms, which might include flushing, sweating and the onset of atrial fibrillation (AF). This study aims to determine the effects of MSG on the occurrence of AF.Methods
We conducted a placebo self-controlled single-arm study in the Academic Medical Centre in Amsterdam. We included paroxysmal AF patients who reported a consistent onset of AF upon MSG intake. During three admissions, participants were subsequently administered: placebo, 1.5?g and 3?g MSG. If AF was recorded after the dose of 1.5?g MSG, patients were given another placebo instead of 3?g MSG. The primary outcome was the onset of AF registered by 24-hour Holter monitoring. The secondary outcomes were any other arrhythmia and the onset of CRS defined as two or more symptoms of CRS after MSG intake.Results
Six men participated in the study. Both 1.5?g and 3?g MSG were unrelated to CRS, arrhythmias or AF occurrence.Conclusion
Peking duck can be put on the Christmas menu without risking guests to be admitted to the emergency department with new episodes of AF.8.
Marjolein Glas H. Bart van den Berg van Saparoea Stephen H. McLaughlin Winfried Roseboom Fan Liu Gregory M. Koningstein Alexander Fish Tanneke den Blaauwen Albert J. R. Heck Luitzen de Jong Wilbert Bitter Iwan J. P. de Esch Joen Luirink 《The Journal of biological chemistry》2015,290(35):21498-21509
Cell division in Escherichia coli involves a set of essential proteins that assembles at midcell to form the so-called divisome. The divisome regulates the invagination of the inner membrane, cell wall synthesis, and inward growth of the outer membrane. One of the divisome proteins, FtsQ, plays a central but enigmatic role in cell division. This protein associates with FtsB and FtsL, which, like FtsQ, are bitopic inner membrane proteins with a large periplasmic domain (denoted FtsQp, FtsBp, and FtsLp) that is indispensable for the function of each protein. Considering the vital nature and accessible location of the FtsQBL complex, it is an attractive target for protein-protein interaction inhibitors intended to block bacterial cell division. In this study, we expressed FtsQp, FtsBp, and FtsLp individually and in combination. Upon co-expression, FtsQp was co-purified with FtsBp and FtsLp from E. coli extracts as a stable trimeric complex. FtsBp was also shown to interact with FtsQp in the absence of FtsLp albeit with lower affinity. Interactions were mapped at the C terminus of the respective domains by site-specific cross-linking. The binding affinity and 1:1:1 stoichiometry of the FtsQpBpLp complex and the FtsQpBp subcomplex were determined in complementary surface plasmon resonance, analytical ultracentrifugation, and native mass spectrometry experiments. 相似文献
9.
J. J. Soler C. Ruiz Castellano J. Martínez‐de la Puente G. Tomás M. Ruiz‐Rodríguez J. Figuerola 《Journal of evolutionary biology》2015,28(9):1610-1617
Although little is known on the impact of environment on telomere length dynamics, it has been suggested to be affected by stress, lifestyle and/or life‐history strategies of animals. We here compared telomere dynamics in erythrocytes of hatchlings and fledglings of the brood parasite great spotted cuckoos (Clamator glandarius) and of magpies (Pica pica), their main host in Europe. In magpie chicks, telomere length decreased from hatching to fledging, whereas no significant change in telomere length of great spotted cuckoo chicks was found. Moreover, we found interspecific differences in the association between laying date and telomere shortening. Interspecific differences in telomere shortening were interpreted as a consequence of differences in lifestyle and life‐history characteristics of magpies and great spotted cuckoos. In comparison with magpies, cuckoos experience reduced sibling competition and higher access to resources and, consequently, lower stressful environmental conditions during the nestling phase. These characteristics also explain the associations between telomere attrition and environmental conditions (i.e. laying date) for magpies and the absence of association for great spotted cuckoos. These results therefore fit expectations on telomere dynamics derived from interspecific differences in lifestyle and life history of brood parasites and their bird hosts. 相似文献
10.
Detection of a novel stem cell probably involved in normal turnover of the lung airway epithelium 下载免费PDF全文
Marta Ortega‐Martínez Laura E. Rodríguez‐Flores Carlos de‐la‐Garza‐González Jesús Ancer‐Rodríguez Gilberto Jaramillo‐Rangel 《Journal of cellular and molecular medicine》2015,19(11):2679-2681
Regeneration of the lung airway epithelium after injury has been extensively studied. In contrast, analysis of its turnover in healthy adulthood has received little attention. In the classical view, this epithelium is maintained in the steady‐state by the infrequent proliferation of basal or Clara cells. The intermediate filament protein nestin was initially identified as a marker for neural stem cells, but its expression has also been detected in other stem cells. Lungs from CD1 mice at the age of 2, 6, 12, 18 or 24 months were fixed in neutral‐buffered formalin and paraffin‐embedded. Nestin expression was examined by an immunohistochemical peroxidase‐based method. Nestin‐positive cells were detected in perivascular areas and in connective tissue that were in close proximity of the airway epithelium. Also, nestin‐positive cells were found among the cells lining the airway epithelium. These findings suggest that nestin‐positive stem cells circulate in the bloodstream, transmigrate through blood vessels and localize in the lung airway epithelium to participate in its turnover. We previously reported the existence of similar cells able to differentiate into lung chondrocytes. Thus, the stem cell reported here might be a bone marrow‐derived mesenchymal stem cell (BMDMSC) able to generate several types of lung tissues. In conclusion, our findings indicate that there exist a BMDMSC in healthy adulthood that participates in the turnover of the lung airway epithelium. These findings may improve our knowledge about the lung stem cell biology and also provide novel approaches to therapy for devastating pulmonary diseases. 相似文献