Proteomic Profiling of Purified Rabies Virus Particles

While host proteins incorporated into virions during viral budding from infected cell are known to play essential roles in multiple process of the life cycle of progeny virus, these characteristics have been largely neglected in studies on rabies virus(RABV). Here, we purified the RABV virions with good purity and integrity, and analyzed their proteome by nano LC–MS/MS, followed by the confirmation with immunoblot and immuno-electronic microscopy. In addition to the 5 viral proteins, 49 cellular proteins were reproducibly identified to be incorporated into matured RABV virions. Function annotation suggested that 24 of them were likely involved in virus replication. Furthermore, cryo-EM was employed to observe the purified RABV virions, generating high-resolution pictures of the bullet-shaped virion structure of RABV. This study has provided new insights into the host proteins composition in RABV virion and shed the light for further investigation on molecular mechanisms of RABV infection, as well as the discovery of new anti-RABV therapeutics.     

N-糖蛋白去糖基化酶（PNGase）的研究进展

N-糖蛋白去糖基化酶（PNGase）是一种广泛存在于真菌、植物、哺乳动物中的去糖基化酶，可以水解N-糖蛋白或 N-糖肽上天冬酰胺与寡糖链连接的化学键，并释放出完整的N-寡糖。PNGase在生物体内参与蛋白质降解、器官发育、个体生长等过程。人PNGase基因功能缺陷会导致先天性去糖基化障碍，小鼠PNGase缺陷会导致胚胎致死性，线虫PNGase缺陷使其寿命下降。本文对PNGase在不同物种的分布、蛋白质结构、酶学功能及生物学功能进行阐述，为PNGase的生理病理功能及致病机制的基础研究提供思路，为PNGase作为糖生物学工具酶或药物开发的创新应用研究奠定基础。     

Genomic Selection Using Extreme Phenotypes and Pre-Selection of SNPs in Large Yellow Croaker (<Emphasis Type="Italic">Larimichthys crocea</Emphasis>)

Genomic selection (GS) is an effective method to improve predictive accuracies of genetic values. However, high cost in genotyping will limit the application of this technology in some species. Therefore, it is necessary to find some methods to reduce the genotyping costs in genomic selection. Large yellow croaker is one of the most commercially important marine fish species in southeast China and Eastern Asia. In this study, genotyping-by-sequencing was used to construct the libraries for the NGS sequencing and find 29,748 SNPs in the genome. Two traits, eviscerated weight (EW) and the ratio between eviscerated weight and whole body weight (REW), were chosen to study. Two strategies to reduce the costs were proposed as follows: selecting extreme phenotypes (EP) for genotyping in reference population or pre-selecting SNPs to construct low-density marker panels in candidates. Three methods of pre-selection of SNPs, i.e., pre-selecting SNPs by absolute effects (SE), by single marker analysis (SMA), and by fixed intervals of sequence number (EL), were studied. The results showed that using EP was a feasible method to save the genotyping costs in reference population. Heritability did not seem to have obvious influences on the predictive abilities estimated by EP. Using SMA was the most feasible method to save the genotyping costs in candidates. In addition, the combination of EP and SMA in genomic selection also showed good results, especially for trait of REW. We also described how to apply the new methods in genomic selection and compared the genotyping costs before and after using the new methods. Our study may not only offer a reference for aquatic genomic breeding but also offer a reference for genomic prediction in other species including livestock and plants, etc.     

H.pylori可塑区tfs3a分泌系统virB2基因功能

目的对virB2基因编码蛋白进行分析,为virB2基因及其编码蛋白功能提供实验依据。方法利用多种生物学软件以及网站对VirB2蛋白的结构和功能进行分析预测,VirB2蛋白序列通过基因推导获得并由生物公司合成,然后通过免疫动物实验制备鼠抗VirB2蛋白多克隆抗体,同时设计进行VirB2蛋白细胞毒试验(MTT法)。结果virB2基因编码蛋白属于疏水性蛋白,为鞭毛样结构,有较强的细胞毒作用。结论对VirB2蛋白的结构和功能进行了分析预测,证明VirB2蛋白在H.pylori相关的致病性特别是引起胃黏膜炎症方面起到一定的作用,能够为研究H.pylori致病机制提供帮助。     

不同灌溉量夏玉米叶绿素含量的高光谱特征及其反演

植物叶绿素含量直接影响其光合作用，并与植物的光谱特征密切相关。以夏玉米为研究对象，采用人工控水方法研究了夏玉米七叶期不同灌溉量下冠层叶绿素含量特征及其与光谱特征之间的关系。结果表明：灌溉量越少，夏玉米叶片叶绿素含量越低，冠层光谱反射率越高，绿峰位置"红移"，而红边位置"蓝移"。叶绿素含量与光谱特征参数、植被光谱指数之间存在极显著相关关系，据此建立了冠层叶绿素含量高光谱估算模型，且基于植被指数模型较基于单一光谱特征参数模型模拟效果更好。研究结果可为夏玉米叶绿素含量的快速无损测定以及夏玉米干旱监测提供依据。     

Depression among Migrant and Left-Behind Children in China in Relation to the Quality of Parent-Child and Teacher-Child Relationships

The objective of this study was to examine rates of depression among migrant children (MC) and left-behind children (LBC) as compared to non-left-behind children (NLBC) and also to examine the relationship between depression among these children and the quality of their parent-child and teacher-child relationships. This study collected data from a large sample of 3,759 children aged from 8 to 17 years, including 824 who had been left behind by one parent (LBCO), 423 who had been left behind by both parents (LBCB), 568 MC and 1944 NLBC. Children’s Depression Inventory–Short Form was used to measure child depression. Parent-Child Relationship Scale (PCRS) and Teacher-Child Relationship Scale (TCRS) were used to measure the quality of parent-child and teacher-child relationships, respectively. The results showed that the prevalence of depression was 10.5% among NLBC, 13.1% among LBCO, 16.1% among LBCB, and 20.1% among MC. Depression was related to parent-child relationship quality and teacher-child relationship quality. Negative parent-child relationship was more relevant to depression than negative teacher-child relationship among LBCB, while negative teacher-child relationship was the most correlated with depression among MC.     

马尾松胚乳愈伤组织发生的初步研究

为获取马尾松(Pinus massoniana)单倍体材料，建立其胚乳组织培养体系，对马尾松胚乳不同的消毒方法进行筛选，并分析不同基本培养基、生长调节剂配比和热激处理对愈伤诱导的影响。结果表明，胚乳的最佳消毒方式为75%酒精处理30 s+2% NaClO消毒15 min，外植体污染率为0，死亡率仅为15.56%；生长素可促进愈伤诱导且是必需的；细胞分裂素浸泡种子可代替培养基中的细胞分裂素，并能取得比较好的胚乳愈伤诱导效果，1.0 mg·mL-1 6-BA浸泡30 min处理的效果最佳，在培养基WPM+NAA 2.0 mg·L-1+2,4-D 1.0 mg·L-1+蔗糖30 g·L-1+琼脂7 g·L-1中，愈伤诱导率高达87.78%；培养基DCR+NAA 2.0 mg·L-1+6-BA 1.0 mg·L-1+蔗糖30 g·L-1+琼脂7 g·L-1的胚乳愈伤诱导率最高(68.75%)；热激处理可提高胚乳愈伤的诱导率和质量，以相对湿度85%下45 ℃热激10 min最佳，总愈伤诱导率为66.25%，成团愈伤诱导率达8.75%；增殖培养以培养基WPM+NAA 0.1 mg·L-1+6-BA 2.0 mg·L-1+蔗糖30 g·L-1+琼脂7 g·L-1最佳，增殖率达83.33%。