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1.
2.
Mauricio F. Villamar Magdalena Sarah Volz Marom Bikson Abhishek Datta Alexandre F. DaSilva Felipe Fregni 《Journal of visualized experiments : JoVE》2013,(77)
High-definition transcranial direct current stimulation (HD-tDCS) has recently been developed as a noninvasive brain stimulation approach that increases the accuracy of current delivery to the brain by using arrays of smaller "high-definition" electrodes, instead of the larger pad-electrodes of conventional tDCS. Targeting is achieved by energizing electrodes placed in predetermined configurations. One of these is the 4x1-ring configuration. In this approach, a center ring electrode (anode or cathode) overlying the target cortical region is surrounded by four return electrodes, which help circumscribe the area of stimulation. Delivery of 4x1-ring HD-tDCS is capable of inducing significant neurophysiological and clinical effects in both healthy subjects and patients. Furthermore, its tolerability is supported by studies using intensities as high as 2.0 milliamperes for up to twenty minutes.Even though 4x1 HD-tDCS is simple to perform, correct electrode positioning is important in order to accurately stimulate target cortical regions and exert its neuromodulatory effects. The use of electrodes and hardware that have specifically been tested for HD-tDCS is critical for safety and tolerability. Given that most published studies on 4x1 HD-tDCS have targeted the primary motor cortex (M1), particularly for pain-related outcomes, the purpose of this article is to systematically describe its use for M1 stimulation, as well as the considerations to be taken for safe and effective stimulation. However, the methods outlined here can be adapted for other HD-tDCS configurations and cortical targets. 相似文献
3.
Coalescent theory is routinely used to estimate past population dynamics and demographic parameters from genealogies. While early work in coalescent theory only considered simple demographic models, advances in theory have allowed for increasingly complex demographic scenarios to be considered. The success of this approach has lead to coalescent-based inference methods being applied to populations with rapidly changing population dynamics, including pathogens like RNA viruses. However, fitting epidemiological models to genealogies via coalescent models remains a challenging task, because pathogen populations often exhibit complex, nonlinear dynamics and are structured by multiple factors. Moreover, it often becomes necessary to consider stochastic variation in population dynamics when fitting such complex models to real data. Using recently developed structured coalescent models that accommodate complex population dynamics and population structure, we develop a statistical framework for fitting stochastic epidemiological models to genealogies. By combining particle filtering methods with Bayesian Markov chain Monte Carlo methods, we are able to fit a wide class of stochastic, nonlinear epidemiological models with different forms of population structure to genealogies. We demonstrate our framework using two structured epidemiological models: a model with disease progression between multiple stages of infection and a two-population model reflecting spatial structure. We apply the multi-stage model to HIV genealogies and show that the proposed method can be used to estimate the stage-specific transmission rates and prevalence of HIV. Finally, using the two-population model we explore how much information about population structure is contained in genealogies and what sample sizes are necessary to reliably infer parameters like migration rates. 相似文献
4.
Paul A. Volz 《Mycopathologia》1971,43(3-4):337-339
The soil of two Bahamian communities on Abaco Island was examined for keratinophilic fungi. Isolated fungal species in soil identifies possible causal agents of dermatophytoses. Inhabitants of the area may have contaminated the soil, or species present may represent a potential source of new clinical cases. Fungal pathogens have been reported as free living soil saprophytes. 相似文献
5.
Peter Volz 《Zoomorphology》1938,34(2):272-316
Ohne Zusammenfassung 相似文献
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7.
Interaction of extracellular Pseudomonas lipase with alginate and its potential use in biotechnology
Jost Wingender Silke Volz Ulrich K. Winkler 《Applied microbiology and biotechnology》1987,27(2):139-145
Summary Extracellular Pseudomonas lipase is able to interact directly or indirectly with alginate as deduced from the following results: (i) During adsorption chromatography of exolipase the enzyme adsorbed quantitatively to glass beads in the absence of alginate, but not after its preincubation in the presence of the polysaccharide; pretreatment of glass beads with alginate did not prevent enzyme adsorption. (ii) In the presence of alginate exolipase was much more resistant to heat inactivation than in its absence. (iii) In the presence of alginate the increase in exolipase activity caused by the non-ionic detergent Triton X-100 was drastically reduced. (iv) Exolipase could be rapidly and almost completely harvested from cell-free culture fluid of P. aeruginosa 5940 by ethanolic coprecipitation with alginate. After dissolving the coprecipitate in detergent-containing buffer exolipase and polysaccharide could be easily separated by ion-exchange chromatography on DEAE-Sephadex A-25. The coprecipitation method was also successfully applied to exolipases produced by Pseudomonas sp., Chromobacierium viscosum and Rhizopus delamar, thus suggesting potential use of this method in biotechnology. 相似文献
8.
Satish Kumar Marco C. A. M. Bink Richard K. Volz Vincent G. M. Bus David Chagné 《Tree Genetics & Genomes》2012,8(1):1-14
The apple genome sequence and the availability of high-throughput genotyping technologies have initiated a new era where SNP
markers are abundant across the whole genome. Genomic selection (GS) is a statistical approach that utilizes all available
genome-wide markers simultaneously to estimate breeding values or total genetic values. For breeding programmes, GS is a promising
alternative to the traditional marker-assisted selection for manipulating complex polygenic traits often controlled by many
small-effect genes. Various factors, such as genetic architecture of selection traits, population size and structure, genetic
evaluation systems, density of SNP markers and extent of linkage disequilibrium, have been shown to be the key drivers of
the accuracy of GS. In this paper, we provide an overview of the status of these aspects in current apple-breeding programmes.
Strategies for GS for fruit quality and disease resistance are discussed, and an update on an empirical genomic selection
study in a New Zealand apple-breeding programme is provided, along with a foresight of expected accuracy from such selection. 相似文献
9.
Volz EM 《Genetics》2012,190(1):187-201
Estimates of the coalescent effective population size N(e) can be poorly correlated with the true population size. The relationship between N(e) and the population size is sensitive to the way in which birth and death rates vary over time. The problem of inference is exacerbated when the mechanisms underlying population dynamics are complex and depend on many parameters. In instances where nonparametric estimators of N(e) such as the skyline struggle to reproduce the correct demographic history, model-based estimators that can draw on prior information about population size and growth rates may be more efficient. A coalescent model is developed for a large class of populations such that the demographic history is described by a deterministic nonlinear dynamical system of arbitrary dimension. This class of demographic model differs from those typically used in population genetics. Birth and death rates are not fixed, and no assumptions are made regarding the fraction of the population sampled. Furthermore, the population may be structured in such a way that gene copies reproduce both within and across demes. For this large class of models, it is shown how to derive the rate of coalescence, as well as the likelihood of a gene genealogy with heterochronous sampling and labeled taxa, and how to simulate a coalescent tree conditional on a complex demographic history. This theoretical framework encapsulates many of the models used by ecologists and epidemiologists and should facilitate the integration of population genetics with the study of mathematical population dynamics. 相似文献
10.
Magdalena Sarah Volz Vanessa Suarez-Contreras Mariana E. Mendonca Fernando Santos Pinheiro Lotfi B. Merabet Felipe Fregni 《PloS one》2013,8(1)