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1.
Batool Ossareh-Nazari Carlos A. Ni?o Mario H. Bengtson Joong-Won Lee Claudio A.P. Joazeiro Catherine Dargemont 《The Journal of cell biology》2014,204(6):909-917
Autophagy, the process by which proteins or organelles are engulfed by autophagosomes and delivered for vacuolar/lysosomal degradation, is induced to ensure survival under starvation and other stresses. A selective autophagic pathway for 60S ribosomal subunits elicited by nitrogen starvation in yeast—ribophagy—was recently described and requires the Ubp3-Bre5 deubiquitylating enzyme. This discovery implied that an E3 ligases act upstream, whether inhibiting the process or providing an initial required signal. In this paper, we show that Ltn1/Rkr1, a 60S ribosome-associated E3 implicated in translational surveillance, acts as an inhibitor of 60S ribosomal subunit ribophagy and is antagonized by Ubp3. The ribosomal protein Rpl25 is a relevant target. Its ubiquitylation is Ltn1 dependent and Ubp3 reversed, and mutation of its ubiquitylation site rendered ribophagy less dependent on Ubp3. Consistently, the expression of Ltn1—but not Ubp3—rapidly decreased after starvation, presumably to allow ribophagy to proceed. Thus, Ltn1 and Ubp3-Bre5 likely contribute to adapt ribophagy activity to both nutrient supply and protein translation. 相似文献
2.
Kyung Suk Lee Amanda B. Marciel Alexander G. Kozlov Charles M. Schroeder Timothy M. Lohman Taekjip Ha 《Journal of molecular biology》2014
Single-stranded DNA binding proteins (SSBs) selectively bind single-stranded DNA (ssDNA) and facilitate recruitment of additional proteins and enzymes to their sites of action on DNA. SSB can also locally diffuse on ssDNA, which allows it to quickly reposition itself while remaining bound to ssDNA. In this work, we used a hybrid instrument that combines single-molecule fluorescence and force spectroscopy to directly visualize the movement of Escherichia coli SSB on long polymeric ssDNA. Long ssDNA was synthesized without secondary structure that can hinder quantitative analysis of SSB movement. The apparent diffusion coefficient of E. coli SSB thus determined ranged from 70,000 to 170,000 nt2/s, which is at least 600 times higher than that determined from SSB diffusion on short ssDNA oligomers, and is within the range of values reported for protein diffusion on double-stranded DNA. Our work suggests that SSB can also migrate via a long-range intersegment transfer on long ssDNA. The force dependence of SSB movement on ssDNA further supports this interpretation. 相似文献
3.
Tamara Utermark Fabienne Schmit Sang Hyun Lee Xueliang Gao Brian S. Schaffhausen Thomas M. Roberts 《Journal of virology》2014,88(18):10673-10679
4.
Bong Jin Kim Kyung Seob Song Hyun-Hee Kong Hee-Jae Cha Meesun Ock 《The Korean journal of parasitology》2014,52(1):85-87
We encountered a patient with heavy Hymenolepis nana infection. The patient was a 44-year-old Korean man who had suffered from chronic hepatitis (type B) for 15 years. A large number of H. nana adult worms were found during colonoscopy that was performed as a part of routine health screening. The parasites were scattered throughout the colon, as well as in the terminal ileum, although the patient was immunocompetent. Based on this study, colonoscopy may be helpful for diagnosis of asymptomatic H. nana infections. 相似文献
5.
Do-Soon Park Sung-Jin Na Shin Hyeong Cho Kyung Ja June Young-Chae Cho Young-Ha Lee 《The Korean journal of parasitology》2014,52(4):391-397
We evaluated the status of Clonorchis sinensis infection and potential risk factors among residents of riverside areas (Geumgang) in Muju-gun, Jeollabuk-do (Province), Korea. From January to February 2010, a total of 349 (171 males, 178 females) stool samples were collected and examined by the formalin-ether concentration technique. Also, village residents were interviewed using questionnaires to obtain information about C. sinensis infection-related risk factors. Overall egg-positive rate of C. sinensis was 13.2%. Egg-positive rates were significantly higher in males, farmers, and residents who had lived there more than 20 years, and in residents who had eaten raw freshwater fish than in opposite groups, respectively. However, there was no significant difference between age groups, education levels, cigarette smoking, alcohol drinking, health status, past history of infection, and experience of clonorchiasis medication and examination. Logistic regression analysis was performed to determine risk factors for clonorchiasis. On univariate analysis, the odds ratios for males, farmers, those who had lived there more than 20 years, and who had eaten raw freshwater fish were 2.41, 4.44, 3.16, and 4.88 times higher than those of the opposites, respectively. On multivariate analysis, the odds ratio of residents who had eaten raw freshwater fish was 3.2-fold higher than that of those who had not. These results indicate that residents living in Muju-gun, along the Geum River, Korea, have relatively high C. sinensis egg-positive rates, and the habit of eating raw freshwater fish was the major factor for the maintenance of clonorchiasis. 相似文献
6.
Lu Qiao Yajun Yang Pengcheng Fu Sile Hu Hang Zhou Shouneng Peng Jingze Tan Yan Lu Haiyi Lou Dongsheng Lu Sijie Wu Jing Guo Li Jin Yaqun Guan Sijia Wang Shuhua Xu Kun Tang 《遗传学报》2018,45(8):419-432
It is a long-standing question as to which genes define the characteristic facial features among different ethnic groups. In this study, we use Uyghurs, an ancient admixed population to query the genetic bases why Europeans and Han Chinese look different. Facial traits were analyzed based on high-dense 3D facial images; numerous biometric spaces were examined for divergent facial features between European and Han Chinese, ranging from inter-landmark distances to dense shape geometrics. Genome-wide association studies(GWAS) were conducted on a discovery panel of Uyghurs. Six significant loci were identified, four of which, rs1868752, rs118078182, rs60159418 at or near UBASH3B, COL23A1, PCDH7 and rs17868256 were replicated in independent cohorts of Uyghurs or Southern Han Chinese. A prospective model was also developed to predict 3D faces based on top GWAS signals and tested in hypothetic forensic scenarios. 相似文献
7.
孢粉学是解决植物分类中疑难类群物种微形态分化的重要方法,随着分子系统学的发展,结合这两门学科的优势可以更加有效地解决疑难类群的分类学问题。鳞盖蕨属(Microlepia)是一个分类困难的疑难类群,采用孢粉学与分子系统学一一对应的方法,以及居群取样方式,选取280份样本,联合4个叶绿体片段(rbcL、trnL-F、psbA-trnH和rps4),采用最大似然法和贝叶斯法构建该属的系统发生关系,在此基础上对凭证标本中100份材料的孢子进行观察和分析。综合分子系统学和孢粉学的研究结果,得出结论:(1)在形态学研究中广泛被接受的15个物种得到了单系支持,并厘清了分类困难的复合群;(2)发现边缘鳞盖蕨(M. marginata)可能存在隐性种;(3)建议恢复过去归并处理为异名的瑶山鳞盖蕨(M. yaoshanica)、罗浮鳞盖蕨(M. lofoushanensis)、四川鳞盖蕨(M. szechuanica)以及滇西鳞盖蕨(M. subspeluncae);(4)提出鳞盖蕨属可能存在杂交现象;(5)提出鳞盖蕨属完整的属下分类建议。 相似文献
8.
9.
Fang-Hua Lee Rosemarie Mason Hugh Welles Gerald H. Learn Brandon F. Keele Mario Roederer Katharine J. Bar 《Journal of virology》2015,89(24):12388-12400
10.
华北驼绒藜开花生物学特性研究 总被引:3,自引:0,他引:3
对华北驼绒藜的开花生物学特性进行了具体调查统计研究.结果显示,华北驼绒藜种群形成了一系列适应风媒传粉的花部特征:单性花,雌雄同株;雄花序细长而柔软,雄蕊4枚,无苞片;雌花小,无花冠,柱头指状,具有大量乳突细胞,便于捕捉花粉;居群内同一植株雌、雄花花期不一致性较高,花期不遇;每枝条雄花开花持续时间频率最高为7 d,而雌花开花持续时间频率最高为6 d;雌、雄花序呈单峰连续集中开花式样;雌、雄花始花时间与花期长度均呈极显著负相关(雌花r=-0.569,P<0.01;雄花r=-0.665,P<0.01),开花数与花期长度则为显著正相关关系(r=0.083,P<0.01),(r=0.346,P<0.01).研究表明,华北驼绒藜在长期的进化过程中,形成了同株雌、雄花花期不遇的生殖策略,因而减少了同株授粉的比例,提高了结实率. 相似文献