Population genomics reveals structure at the individual,host‐tree scale and persistence of genotypic variants of the undomesticated yeast Saccharomyces paradoxus in a natural woodland

Genetic diversity in experimental, domesticated and wild populations of the related yeasts, Saccharomyces cerevisiae and Saccharomyces paradoxus, has been well described at the global scale. We investigated the population genomics of a local population on a small spatial scale to address two main questions. First, is there genomic variation in a S. paradoxus population at a spatial scale spanning centimetres (microsites) to tens of metres? Second, does the distribution of genomic variants persist over time? Our sample consisted of 42 S. paradoxus strains from 2014 and 43 strains from 2015 collected from the same 72 microsites around four host trees (Quercus rubra and Quercus alba) within 1 km² in a mixed hardwood forest in southern Ontario. Six additional S. paradoxus strains recovered from adjacent maple and beech trees in 2015 are also included in the sample. Whole‐genome sequencing and genomic SNP analysis revealed five differentiated groups (clades) within the sampled area. The signal of persistence of genotypes in their microsites from 2014 to 2015 was highly significant. Isolates from the same tree tended to be more related than strains from different trees, with limited evidence of dispersal between trees. In growth assays, one genotype had a significantly longer lag phase than the other strains. Our results indicate that different clades coexist at fine spatial scale and that population structure persists over at least a one‐year interval in these wild yeasts, suggesting the efficacy of yearly sampling to follow longer term genetic dynamics in future studies.     

The global pyrogenic carbon cycle and its impact on the level of atmospheric CO2 over past and future centuries

The incomplete combustion of vegetation and dead organic matter by landscape fires creates recalcitrant pyrogenic carbon (PyC), which could be consequential for the global carbon budget if changes in fire regime, climate, and atmospheric CO₂ were to substantially affect gains and losses of PyC on land and in oceans. Here, we included global PyC cycling in a coupled climate–carbon model to assess the role of PyC in historical and future simulations, accounting for uncertainties through five sets of parameter estimates. We obtained year‐2000 global stocks of (Central estimate, likely uncertainty range in parentheses) 86 (11–154), 47 (2–64), and 1129 (90–5892) Pg C for terrestrial residual PyC (RPyC), marine dissolved PyC, and marine particulate PyC, respectively. PyC cycling decreased atmospheric CO₂ only slightly between 1751 and 2000 (by 0.8 Pg C for the Central estimate) as PyC‐related fluxes changed little over the period. For 2000 to 2300, we combined Representative Concentration Pathways (RCPs) 4.5 and 8.5 with stable or continuously increasing future fire frequencies. For the increasing future fire regime, the production of new RPyC generally outpaced the warming‐induced accelerated loss of existing RPyC, so that PyC cycling decreased atmospheric CO₂ between 2000 and 2300 for most estimates (by 4–8 Pg C for Central). For the stable fire regime, however, PyC cycling usually increased atmospheric CO₂ (by 1–9 Pg C for Central), and only the most extreme choice of parameters maximizing PyC production and minimizing PyC decomposition led to atmospheric CO₂ decreases under RCPs 4.5 and 8.5 (by 5–8 Pg C). Our results suggest that PyC cycling will likely reduce the future increase in atmospheric CO₂ if landscape fires become much more frequent; however, in the absence of a substantial increase in fire frequency, PyC cycling might contribute to, rather than mitigate, the future increase in atmospheric CO₂.     

Purification and characterization of an iron-binding protein from the blue crab (Callinectes sapidus)

The presence of an iron-binding protein in the hemolymph of the blue crab (Callinectes sapidus) was detected by gel filtration of 59Fe-labeled hemolymph. The iron-binding protein was purified to homogeneity by ion exchange chromatography. 2. This protein has a mol. wt of 155,000 and consists of a single polypeptide chain with an isoelectric point of 5.0. 3. Analysis of the iron-loaded protein indicates that it has a high affinity for iron and the capacity to bind approximately 10 atoms iron/molecule protein. 4. The isolation of a specific iron-binding protein from the blue crab (Callinectes sapidus) provides additional support for the proposal that such proteins are an ancient evolutionary development not necessarily linked to the appearance of iron proteins (hemoglobin and hemerythrin) as a means for oxygen transport.     

Effect of propagule pressure on the establishment and spread of the little fire ant Wasmannia auropunctata in a Gabonese oilfield

We studied the effect of propagule pressure on the establishment and subsequent spread of the invasive little fire ant Wasmannia auropunctata in a Gabonese oilfield in lowland rain forest. Oil well drilling, the major anthropogenic disturbance over the past 21 years in the area, was used as an indirect measure of propagule pressure. An analysis of 82 potential introductions at oil production platforms revealed that the probability of successful establishment significantly increased with the number of drilling events. Specifically, the shape of the dose–response establishment curve could be closely approximated by a Poisson process with a 34% chance of infestation per well drilled. Consistent with our knowledge of largely clonal reproduction by W. auropunctata , the shape of the establishment curve suggested that the ants were not substantially affected by Allee effects, probably greatly contributing to this species' success as an invader. By contrast, the extent to which W. auropunctata spread beyond the point of initial introduction, and thus the extent of its damage to diversity of other ant species, was independent of propagule pressure. These results suggest that while establishment success depends on propagule pressure, other ecological or genetic factors may limit the extent of further spread. Knowledge of the shape of the dose–response establishment curve should prove useful in modelling the future spread of W. auropunctata and perhaps the spread of other clonal organisms.     

High-performance liquid chromatography and ultraviolet spectrophotometry for quantitation of tryptophan in barytic hydrolysates

A procedure for quantitation of tryptophan in feedstuffs is described. It is based on barytic hydrolysis of material at 125 degrees C for 16 h, acidification of hydrolysate to pH 3 with HCl, high-performance liquid chromatography on Nova Pak C18 (Waters Assoc.), and spectrophotometric determination of tryptophan at 280 nm. The recovery of tryptophan from lysozyme added to samples ranges from 98.7 to 100%.     

Zein of maize grain. Preparation and characterization]

A laboratory procedure for isolation and purification of zein from grains of 4 varieties of Maize was described. The preparations were characterized by their physicochemical properties. Upon polyacrylamide gel electrophoresis in sodium dodecyl sulphate (SDS), native zein (from INRA 260 hybrid) was resolved into 2 major classes with average molecular weights of 45,000 and 22,000. After reduction with mercaptoethanol zein contained only two subunits of 22,000 and 24,000 daltons. Upon starch gel electrophoresis in 6 M urea at pH 3.5, native zein exhibited five major or medium intensity bands and several minor ones. The latter, under reducing conditions, disappeared to reinforce the major bands or to yield some new minor bands. Amino acid analysis revealed a very low content of lysine. The NH2-terminal amino acids were determined to be threonine and phenylalanine with a preponderance of the former. Zeins isolated from the varieties studied appeared tohave the same NH2-terminal residues and similar amino acid compositions with an arginine/histidine ratio ranging from 1.1 to 1.2. They differed in relative importance of components, detected by electrophoresis in the presence of SDS or urea. Changes in zein characteristics with the grain genotype allow one to conclude that the components of molecular weights of 22,000 and 24,000 consist of several subunits differing in charge and amino acid content.     

Questions and answers: Corporations,gift taxes,children's income,hiring staff

Although odontogenic keratocysts are benign they are often locally destructive and tend to recur after conservative surgical treatment. They must therefore be distinguished from other cysts of the jaw. Keratocysts possess outpouchings and microscopic daughter cysts from which recurrences may arise. Histologic examination is essential for diagnosis since the appearances on roentgenograms and at operation usually do not reveal the true nature of the lesion. Since many nondental surgeons and pathologists are unaware of odontogenic keratocysts a case is presented in which surgical treatment was originally conservative and finally relatively radical.