Harvest Refugia in Marine Invertebrate Fisheries: Models and Applications to the Red Sea Urchin, Strongylocentrotus franciscanus

Benthic marine invertebrates with planktonic larvae may exhibitAllee effects in reproduction or recruitment. Hydrodynamic considerationsand experimental evidence suggest that species broadcastinggametes suffer greatly reduced fertilization efficiencies asdensities decline. There is also evidence for some species,including the red sea urchin, that post-dispersal recruitmentsuccess declines at low densities of adults, if adults provideshelter from predators or other sources of mortality. Speciesdisplaying strong Allee effects may be susceptible to catastrophicpopulation collapses with slight increases in mortality dueto harvesting or natural causes. A simple two patch logisticmodel suggests that the establishment of a harvest refuge isnecessary to prevent collapses and maintain sustainable catchesat high levels of harvesting effort. A more detailed, age structuredmodel based on the biology of the red sea urchin, Strongylocentrotusfranciscanus produces similar results. Effects of harvestingstrategies are sensitive to Allee effects caused by both fertilizationefficiency and the disruption of adult spine canopies. Theoreticalrequirements for the size and spacing of marine reserves dependsupon the dispersal abilities of the target species. Multiplereserves, spaced more closely than the average larval dispersaldistance, appear to be an effective and conservative strategyfor maintaining healthy populations and sustainable levels ofharvest.     

The Accumulation and Transport of Calcium in Barley Roots

The accumulation and transport of Ca by various zones of 6-day old barley roots (Hordeum vulgare L.) were examined with special reference to their relationship to the salt status of the root. The initial salt content had a profound effect on Ca transport and a lesser effect on Ca accumulation. High-salt roots transported Ca in much larger amounts than did low salt roots. In low salt roots the apical zone was more active in transporting Ca to the conducting tissue than were the mid or basal zones However, in high salt roots all zones were about equally active in transporting Ca. The metabolic inhibitor, DNP, had little effect on accumulation but inhibited transport very effectively. The effect of DNP was more pronounced on transport from the apical zone than from the other root zones. Calcium applied anywhere along the root length moved only basally and its polarized longitudinal movement was maintained irrespective of the salt status of the root. The movement of Ca was characterized by a rapid release of preabsorbed Ca and a ready exchange of apoplastic Ca. The hypothesis is presented that cellular Ca is in a relatively mobile state. Its entry into the symplasm is the rate limiting step in longitudinal transport and its overall movement is metabolically controlled.     

Characterization of polymorphic microsatellite markers for the endangered Malagasy radiated tortoise (Geochelone radiata)

The radiated tortoise (Geochelone radiata) is an endangered endemic species from Madagascar that inhabits the semiarid spiny forest of the southern part of the island. Habitat destruction and illegal harvesting greatly threaten this species, as attested by the significant reduction of its distribution area in the past 30 years. In order to undertake appropriate conservation actions, it is essential to acquire a better knowledge of its genetic structure. For this study, 145 blood samples were collected from three populations of radiated tortoises in southwestern Madagascar. Eight microsatellite loci were found to be polymorphic, and allelic diversity and observed heterozygosity were high for all markers.     

Population genomics of wild and laboratory zebrafish (Danio rerio)

Understanding a wider range of genotype–phenotype associations can be achieved through ecological and evolutionary studies of traditional laboratory models. Here, we conducted the first large‐scale geographic analysis of genetic variation within and among wild zebrafish (Danio rerio) populations occurring in Nepal, India, and Bangladesh, and we genetically compared wild populations to several commonly used lab strains. We examined genetic variation at 1832 polymorphic EST‐based single nucleotide polymorphisms (SNPs) and the cytb mitochondrial gene in 13 wild populations and three lab strains. Natural populations were subdivided into three major mitochondrial DNA clades with an average among‐clade sequence divergence of 5.8%. SNPs revealed five major evolutionarily and genetically distinct groups with an overall F_ST of 0.170 (95% CI 0.105–0.254). These genetic groups corresponded to discrete geographic regions and appear to reflect isolation in refugia during past climate cycles. We detected 71 significantly divergent outlier loci (3.4%) and nine loci (0.5%) with significantly low F_ST values. Valleys of reduced heterozygosity, consistent with selective sweeps, surrounded six of the 71 outliers (8.5%). The lab strains formed two additional groups that were genetically distinct from all wild populations. An additional subset of outlier loci was consistent with domestication selection within lab strains. Substantial genetic variation that exists in zebrafish as a whole is missing from lab strains that we analysed. A combination of laboratory and field studies that incorporates genetic variation from divergent wild populations along with the wealth of molecular information available for this model organism provides an opportunity to advance our understanding of genetic influences on phenotypic variation for a vertebrate species.