Active groups of extracellular endo-D-galacturonanase of aspergillus niger derived from pH effect on kinetic data.

In an attempt to characterize the groups essential for the catalytic action extracellular endo-D-galacturonanase of Aspergillus niger (poly (1,4-alpha-D-galacturonide) glycanohydrolase, EC 3.2.1.15) the behaviour of the kinetic parameters as a function of pH was examined. The dependence of kcat and kcat/Km on pH suggests that two dissociable groups are involved, for which the pK values of about 3.0 and 5.0 in the free enzyme and 3.06 and 5.72 in the catalytic complex were found at 30 degrees C. These values and the value of the heat of ionization of the acidic group, deltaHi 6.48 kcal/mol, resulting from the pKa values obtained at 20 degrees C (5.91) and at 30 degrees C (5.72) suggest the participation of a carboxylate group and a protonated imidazole group of histidine in the reaction catalyzed by endo-D-galacturonanase.     

Selective isolation of endo-D-galacturonanase of Aspergillus niger based on interaction with tri(D-galactosiduronic acid) covalently bound to poly(hydroxyalkyl methacrylate)

A selective affinity-adsorbent for the extracellular endo-D-galacturonanase (E.C. 3.2.1.15) of Aspergillus niger was prepared by covalent coupling of tri(D-galactosiduronic acid) to Separon, a poly(hydroxyalkyl methacrylate) gel. Complexing of the enzyme with the adsorbent is pH dependent; maximal interaction occurs at the optimum pH for enzyme activity. The enzyme was quantitatively displaced from the adsorbent either by changing the pH or by bioelution with soluble tri(D-galactosiduronic acid) or other substrate. Within the range of substitution of Separon examined [content of tri(D-galactosiduronic acid) 1.7-6.7%] the amount of endo-D-galacturonanase retained was proportional to the content of affinity ligand. Under the same conditions, unsubstituted carrier did not complex with endo-D-galacturonanase. The dissociation constant of the affinity complex, as determined by zonal analysis, kinetic measurements, and by means of the adsorption isotherm KL (0.54 mmol.L-1), is close to the value (KI 0.44 mmol.L-1) obtained by the two first methods with soluble tri(D-galactosiduronic acid). The results show that adsorption of endo-D-galacturonanase on tri(D-galactosiduronic acid)-Separon is due exclusively to active-site-directed interaction with bound affinity-ligand.     

Purification and characterization of an extracellular exo-D-galacturonanase of Aspergillus niger.

A D-galacturonanase (EC 3.2.1.67) catalyzing the degradation of D-galacturonans by terminal action pattern was purified from a culture filtrate of Aspergillus niger by a procedure including the salting-out with ammonium sulfate, precipitation by ethanol, chromatography on DEAE-cellulose, and gel chromatography on Sephadex G-100. The obtained preparation was slightly contaminated by an enzymically inactive protein fraction. Maximum activity and stability of the enzyme was observed at pH 5.2. The enzyme degrades digalacturonic acid, p-nitrophenyl-alpha-D-galactopyranuronide, as well as oligogalacturonides containing at the nonreducing end 4-deoxy-L-threo-hexa-4-enopyranosyluronate. It differs from all A. niger enzymes so far described which degrade D-galaturonans by the terminal action pattern, in not clearly preferring low-molecular substrates. It is therefore classified as an exo-D-galacturonanase.     

Mode of action of endopolygalacturonase immobilized by adsorption and by covalent binding via amino groups

Action pattern of endopolygalacturonase (E.C.3.2.1.15) immobilized by adsorption on porous powdered poly(ethyleneterephthalate) and covalently bound via amino groups on poly(2, 6-dimethyl-p-phenyleneoxide) and poly(6-caprolactame), respectively, were investigated in suspension and packed columns using polymeric and oligomeric D-galactosiduronates as substrates. The covalent binding invariably led to a lowering of randomness of degradation of high-molecular substrates and loss of specificity of (3 + 1) splitting of tetra(galactosiduronic acid), typical of the free enzyme. In the adsorbed endopolygalacturonase the degree of randomness of degradation of D-galacturonan and K(m,app) value were dependent on the substrate transfer; the former parameter increased, the later decreased with increasing flow-rate of the substrate through the immobilized enzyme bed. The action pattern on low-molecular substrates was not altered. The changes in action pattern of the covalently immobilized endopolygalacturonase are ascribed to sterical limitations resulting from a binding of the enzyme molecule in the proximity of its active site. In endopolygalacturonase bound to the support by hydrophobic interactions external diffusion effects are regarded the factors governing the enzyme action.     

Endopolygalacturonase immobilized on epoxide-containing supports

Summary Endopolygalacturonase was immobilized onto 3-(2,3-epoxypropoxypropyl)-silica and oxirane-acrylic beads. Optimum conditions of immobilization and catalytic properties of the immobilized enzyme preparations are described.     

PectinaseAspergillus sp. polygalacturonase: Multiplicity,divergence, and structural patterns linking fungal,bacterial, and plant polygalacturonases

Nine forms ofAspergillus sp. polygalacturonase were purified from a commercial preparation of pectinase Rohament P using chromatographies and chromatofocusing. Individual forms differ in isoelectric point, and at least five differ in structure; whereas molecular masses and enzymatic properties are largely identical. Four forms with freea-amino groups have identical start positions but internal amino acid replacements. Therefore, the multiplicity is derived from true heterogeneities and not from N-terminal truncations. Peptide analysis of the major polygalacturonase reveals large variations toward the enzyme from otherAspergillus species (72–75% residue differences, depending on species) but additional similarities with the enzyme from bacterial and plant sources (only 66–71% residue differences toward theErwinia, tomato, and peach enzymes). Combined with previous data, these facts show polygalacturonase to exhibit extensive multiplicity and much variability, but also unexpected similarities between distantly related forms with conserved functional properties     

Endopolygalacturonase immobilized on a porous poly(2,6-dimethyl-p-phenyleneoxide)

Summary Endopolygalacturonase was immobilized by coupling on to porous poly(2,6-dimethyl-p-phenyleneoxide) activated by adsorbed glutaraldehyde. Catalytic properties, stability and action pattern of the immobilized enzyme are described.     

Endopolygalacturonase immobilized on a porous poly(6-caprolactame)

Summary Endopolygalacturonase was immobilized by covalent coupling onto porous poly (6-caprolactame) activated by glutaraldehyde. Catalytic properties and action pattern of the immobilized enzyme are described.