Synthesis of radiolabeled biphenylsulfonamide matrix metalloproteinase inhibitors as new potential PET cancer imaging agents

Novel matrix metalloproteinase (MMP) inhibitor radiotracers, (S)-3-methyl-2-(2',3',4'-methoxybiphenyl-4-sulfonylamino)-butyric acid [(11)C]methyl ester (1a-c), (S)-3-methyl-2-(2',3',4'-fluorobiphenyl-4-sulfonylamino)-butyric acid [(11)C]methyl ester (1d-f), and (S)-3-methyl-2-(4'-nitrobiphenyl-4-sulfonylamino)-butyric acid [(11)C]methyl ester (1g), a series of substituted biphenylsulfonamide derivatives, have been synthesized for evaluation as new potential positron emission tomography (PET) cancer imaging agents.     

An expressed sequence tag SSR map of tetraploid alfalfa (Medicago sativa L.)

A genetic map constructed from a population segregating for a trait of interest is required for QTL identification. The goal of this study was to construct a molecular map of tetraploid alfalfa (Medicago sativa.) using simple sequence repeat (SSR) markers derived primarily from expressed sequence tags (ESTs) and bacterial artificial chromosome (BAC) inserts of M. truncatula. This map will be used for the identification of drought tolerance QTL in alfalfa. Two first generation backcross populations were constructed from a cross between a water-use efficient, M. sativa subsp. falcata genotype and a low water-use efficient M. sativa subsp. sativa genotype. The two parents and their F₁ were screened with 1680 primer pairs designed to amplify SSRs, and 605 single dose alleles (SDAs) were amplified. In the F₁, 351 SDAs from 256 loci were mapped to 41 linkage groups. SDAs not inherited by the F₁, but transmitted through the recurrent parents and segregating in the backcross populations, were mapped to 43 linkage groups, and 44 of these loci were incorporated into the composite maps. Homologous linkage groups were joined to form eight composite linkage groups representing the eight chromosomes of M. sativa. The composite maps consist of eight composite linkage groups with 243 SDAs from M. truncatula EST sequences, 38 SDAs from M. truncatula BAC clone sequences, and five SDAs from alfalfa genomic SSRs. The total composite map length is 624 cM, with average marker density per composite linkage group ranging from 1.5 to 4.4 cM, and an overall average density of 2.2 cM. Segregation distortion was 10%, and distorted loci tended to cluster on individual homologues of several linkage groups. Electronic Supplementary Material Supplementary material is available for this article at     

Alarm communication in <Emphasis Type="Italic">Ropalidia</Emphasis> social wasps

Summary Alarm pheromones, chemical substances produced by social insects to alert the colony to threat, are the principal means by which colony defence is co-ordinated. We present the results of a study on alarm behaviour in 5 swarming species of wasps belonging to the genus Ropalidia. These species show a remarkably efficient strategy of alarm communication, including visual display and attack synchronization. We show that pheromones released from the venom gland play an important role in alarm recruitment in species belonging to the Ropalidia flavopicta group, but not in Ropalidia sumatrae. We analysed the contents of the venom reservoirs content of four of the studied species by gas chromatography-mass spectrometry. Glands were found to contain a complex mixture of volatile compounds as well as spiroacetals of higher molecular weight. Interestingly, despite all species producing similar chemical compounds from the venom gland, these were found to elicit alarm behaviour in only those species that build nest envelopes, suggesting a link between chemical release of alarm behaviour and the evolution of nest architecture in Ropalidia wasps.Received 19 August 2003; revised 29 February 2004; accepted 10 March 2004     

Molecular analysis of thymoma

Histologic classification of thymomas has significant limitations with respect to both subtype definitions and consistency. In order to better understand the biology of the disease processes, we performed whole genome gene expression analysis. RNA was extracted from fresh frozen tumors from 34 patients with thymomas and followup data was available. Using the Illumina BeadStudio® platform and Human Ref-8 Beadchip, gene expression data was analyzed with Partek Genomics Suite®, and Ingenuity Pathways Analysis (IPA). Unsupervised clustering of gene expression data, representing one of the largest series in literature, resulted in identification of four molecular clusters of tumors (C1–C4), which correlated with histology (P = 0.002). However, neither histology nor clusters correlated with clinical outcomes. Correlation of gene expression data with clinical data showed that a number of genes were associated with either advanced stage at diagnosis or development of recurrence or metastases. The top pathways associated with metastases were amino acid metabolisms, biosynthesis of steroids and glycosphingolipids, cell cycle checkpoint proteins and Notch signaling. The differential expression of some of the top genes related to both metastases and stage was confirmed by RT-PCR in all cases of metastases and matched nonmetastatic cases. A number of potential candidates for therapeutics were also identified.     

Measuring aerobic cycling power as an assessment of childhood fitness

The emergence of obesity, insulin resistance, and type 2 diabetes in children requires a rational, effective public health response. Physical activity remains an important component of prevention and treatment for obesity, type 2 diabetes, and insulin resistance. Studies in adults show cardiovascular fitness to be more important than obesity in predicting insulin resistance. We recently demonstrated that a school-based fitness intervention in children who are overweight could improve cardiovascular fitness, body composition, and insulin sensitivity, but it remains unclear whether accurate assessment of fitness could be performed at the school or outside of an exercise laboratory. To determine whether new methodology using measurement of cycling power could estimate cardiovascular aerobic fitness (as defined by VO2max) in middle school children who were overweight. Thirty-five middle school children (mean age 12 +/- 0.4 years) who were overweight underwent testing on a power sensor-equipped Cycle Ops indoor cycle (Saris Cycling Group, Fitchburg, WI) as well as body composition by dual x-ray absorptiometry and VO2max by treadmill determination. Insulin sensitivity was also estimated by fasting glucose and insulin. Maximal heart rate (MHR) was determined during VO2max testing, and power produced at 80%MHR was recorded. Spearman's rank correlation was performed to evaluate associations. Mean power determined on the indoor cycle at 80% of MHR was 129 +/- 77 watts, and average power at 80% MHR divided by total body weight was 1.5 +/- 0.5. A significant correlation between watts and total body weight was seen for VO2max (P = 0.03), and significant negative correlation was seen between watts/total body weight and fasting insulin (P < 0.05). Among middle school children who were overweight, there was a significant relationship between the power component of fitness and cardiovascular aerobic fitness (measured by VO2max). This more accessible and less intimidating field-based measure of power may prove useful in predicting changes in cardiovascular fitness. Thus, accurate assessment of childhood aerobic fitness may be achievable by measurement of power, possibly within the school environment, at substantially less cost and effort than laboratory-based measurements.     

Monoclonal antibody storage conditions, and concentration effects on immunohistochemical specificity

Monoclonal antibodies against a 24,000 dalton intracellular estrogen-regulated protein in human breast cancer cells were used to study storage conditions and the effects of monoclonal antibody concentrations on immunohistochemical antigen localization. Both hybridoma supernatants and ascites fluid obtained from mice injected with hybridoma cells were used as sources of monoclonal antibodies; the monoclonal antibodies in the ascites fluid were concentrated and purified. Both antibody preparations were stored at 4, -20, or -70 degrees C and periodically tested for activity at these storage conditions. There was no difference in activity for the antibodies between storage at -20 and -70 degrees C. However, when highly diluted antibody was stored at 4 degrees C, the activity was lost within 2 weeks if carrier proteins were not added. These monoclonal antibodies were applied to immunohistochemical staining of different mouse and human tissues processed for routine paraffin sections, using the avidin-biotin-peroxidase procedure. A monoclonal antibody of unrelated specificity was used as control. When these antibodies were used at high concentrations, all the different tissues examined were immunostained. With reduction of the antibody concentration, an immunohistochemical dissection of the tissues was seen until specific immunostaining was reached. When even more highly diluted monoclonal antibody was used, heterogeneity in the staining pattern became very high. On the basis of these results, certain immunohistochemical criteria are proposed for the selection of the optimum concentration of monoclonal antibodies for specific antigen detection.     

11C]GSK2126458 and [18F]GSK2126458, the first radiosynthesis of new potential PET agents for imaging of PI3K and mTOR in cancers

GSK2126458 is a highly potent inhibitor of phosphoinositide 3-kinase (PI3K) and mammalian target of rapamycin (mTOR) with low picomolar to subnanomolar activity. [(11)C]GSK2126458 and [(18)F]GSK2126458, new potential PET agents for imaging of PI3K and mTOR in cancer, were first designed and synthesized in 40-50% and 20-30% decay corrected radiochemical yield, and 370-740 and 37-222GBq/μmol specific activity at end of bombardment (EOB), respectively.