Multiplexed detection of pathogen DNA with DNA-based fluorescence nanobarcodes

Rapid, multiplexed, sensitive and specific molecular detection is of great demand in gene profiling, drug screening, clinical diagnostics and environmental analysis. One of the major challenges in multiplexed analysis is to identify each specific reaction with a distinct label or 'code'. Two encoding strategies are currently used: positional encoding, in which every potential reaction is preassigned a particular position on a solid-phase support such as a DNA microarray, and reaction encoding, where every possible reaction is uniquely tagged with a code that is most often optical or particle based. The micrometer size, polydispersity, complex fabrication process and nonbiocompatibility of current codes limit their usability. Here we demonstrate the synthesis of dendrimer-like DNA-based, fluorescence-intensity-coded nanobarcodes, which contain a built-in code and a probe for molecular recognition. Their application to multiplexed detection of the DNA of several pathogens is first shown using fluorescence microscopy and dot blotting, and further demonstrated using flow cytometry that resulted in detection that was sensitive (attomole) and rapid.     

Dendrimer-like DNA-based fluorescence nanobarcodes

A major challenge in clinical diagnostics and environmental analysis is the difficulty in rapid and sensitive detection of multiple target molecules simultaneously (i.e., multiplexed detections). Our group has designed and synthesized a dendrimer-like DNA (DL-DNA) that is multivalent and anisotropic; using this unique DNA structure, we have developed a fluorescence-tagged nanobarcode system for multiplex detection. This nanobarcode system allows the rapid and sensitive detection of multiple pathogens simultaneously using the ratios of two different fluorescent dyes, green and red, with which different DL-DNAs are labeled. The key step of our nanobarcode model lies in the monodisperse preparation of DL-DNA. Two methods, solution phase and solid phase, are presented here. With slight modifications, this platform technology can also be extended to the multiplexed detection of RNA and proteins. This protocol can be completed in 2-5 d.     

Ordered Hexagonal Nanoplasmonic Au Nanoparticle Arrays: AAO-Assisted Thermal Treatment Synthesis and Application as Surface-Enhanced Raman Scattering Substrates

We have reported on the synthesis of ordered hexagonal Au nanoparticle (NPs) arrays by anodic alumina oxide templates (AAO)-assisted thermal treatment. This simple process has led to the formation of an ordered hexagonal array of Au NPs on the surface of AAO. SERS properties of the ordered hexagonal Au NPs could be obtained by varying the size of Au NPs. Compared with the Au thin film on AAO, the SERS intensity of rhodamine adsorbed on the ordered hexagonal Au NPs was about 1000 times stronger. And the hexagonal Au NPs array films have had stronger Raman-enhanced signal compared to the disorder Au NPs films. Simulations according to the three-dimensional finite-difference time domain (3D-FDTD) have displayed that these electric field enhancements of the ordered hexagonal Au NPs are strongly dependent on the gap distance. Plasmonic ordered hexagonal Au NPs could provide us new platforms to realize novel optoelectronic devices.

     

传染性法氏囊病病毒在次代鸡胚成纤维细胞上的增殖

研究了用次代鸡胚成纤维细胞（SCEF）增殖传染性法氏囊病病毒（IBDV）的可能性。在研究了原代鸡胚成纤维细胞（PCEF）与SCEF的生长特性的基础上,就各种培养方式采用PCEF与SCEF增殖IBDV进行了比较。结果表明,可用SCEF代替PCEF进行IBDV的增殖培养。     

New Binder‐Free Metal Phosphide–Carbon Felt Composite Anodes for Sodium‐Ion Battery

Metal phosphides are promising anode candidates for sodium‐ion batteries (SIBs) due to their high specific capacity and low operating potential but suffer from poor cycling stability caused by huge volume expansion and poor solid‐state ion transfer rate. Herein, a new strategy to grow a new class of mesoporous metal phosphide nanoarrays on carbon felt (CF) as binder‐free anodes for SIBs is reported. The resultant integrated electrodes demonstrate excellent cycling life up to 1000 times (>90% retention rate) and high rate capability of 535 mAh g^?1 at a current density of 4 A g^?1. Detailed characterization reveals that the synergistic effect of unique mesoporous structure for accommodating huge volume expansion during sodiation/desodiation process, ultrasmall primary particle size (≈10 nm) for providing larger electrode/electrolyte contact area and shorter ion diffusion distance, and 3D conductive networks for facilitating the electrochemical reaction, leads to the extraordinary battery performance. Remarkably, a full SIB using the new CoP₄/CF anode and a Na₃V₂(PO₄)₂F₃ cathode delivers an average operating voltage of ≈3.0 V, a reversible capacity of 553 mAh g^?1, and very high energy density of ≈280 Wh kg^?1 for SIBs. A flexible SIB with outstanding mechanical strength based on this binder‐free new anode is also demonstrated.     

Evidence that dystroglycan is associated with dynamin and regulates endocytosis

Disruption of the dystroglycan gene in humans and mice leads to muscular dystrophies and nervous system defects including malformation of the brain and defective synaptic transmission. To identify proteins that interact with dystroglycan in the brain we have used immunoaffinity purification followed by mass spectrometry (LC/MS-MS) and found that the GTPase dynamin 1 is a novel dystroglycan-associated protein. The beta-dystroglycan-dynamin 1 complex also included alpha-dystroglycan and Grb2. Overlay assays indicated that dynamin interacts directly with dystroglycan, and immunodepletion showed that only a pool of dynamin is associated with dystroglycan. Dystroglycan was associated and colocalized immunohistochemically with dynamin 1 in the central nervous system in the outer plexiform layer of retina where photoreceptor terminals are found. Endocytosis in neurons is both constitutive, as in non-neural cells, and regulated by neural activity. To assess the function of dystroglycan in the former, we have assayed transferrin uptake in fibroblastic cells differentiated from embryonic stem cells null for both dystroglycan alleles. In wild-type cells, dystroglycan formed a complex with dynamin and codistributed with cortactin at membrane ruffles, which are organelles implicated in endocytosis. Dystroglycan-null cells had a significantly greater transferrin uptake, a process well known to require dynamin. Expression of dystroglycan in null cells by infection with an adenovirus containing dystroglycan reduced transferrin uptake to levels seen in wild-type embryonic stem cells. These data suggest that dystroglycan regulates endocytosis possibly as a result of its interaction with dynamin.     

Dual-Band Infrared Perfect Absorber Based on a Ag-Dielectric-Ag Multilayer Films with Nanoring Grooves Arrays

In this paper, we demonstrate a dual-band metamaterial perfect absorber based on a Ag-dielectric-Ag multilayer nanostructure. The structure of top metal film covers nanoring grooves array. A dielectric layer has a function of confining electromagnetic fields. Theoretical analysis shows that two absorption peaks (1059 nm and 1304 nm) with the absorption of 99.2% and 99.9% have been achieved, respectively. The physical origin of perfect absorption peaks are related to the Fabry-Perot resonance effect and localized surface plasmon resonance (LSPR) of the nanoring grooves. Its perfect absorption and resonance wavelength can be well regulated by adjusting the relevant structural parameters. Additionally, the absorber demonstrates good operation angle-polarization-tolerance at wide incident angles (0–60°). We believe that our design has a promising application in plasmon-enhanced photovoltaic, optical absorption switching, and modulator optical communications in the infrared regime.

     

广藿香内生真菌Ogataea sp. RW-S10次级代谢产物研究

为挖掘广藿香(Pogostemon cablin)内生真菌活性代谢产物,采用多种柱色谱分离方法从广藿香内生真菌Ogataea sp.RW-S10的次级代谢产物中分离得到7个化合物,根据波谱数据分别鉴定为ogataearin (1)、phenylalaninol (2)、对羟基苯乙酮(3)、bis(dethio)bis(methylsulfanyl) gliotoxin (4)、N-苯乙基乙酰胺(5)、lumichrome (6)和dehydroxypaxilline (7),其中化合物1为新化合物。化合物1具有α-葡萄糖苷酶抑制活性,其IC₅₀值为39.38 μmol/L。     

Nucleoside phosphocholine amphiphile for in vitro DNA transfection

A new transfection reagent based on nucleoside phosphocholine amphiphile leading to high transfection efficacy and low cytotoxicity is described. TEM, ethidium bromide displacement assays, agarose gel electrophoresis and SAXS studies support the formation of lipoplexes for the transfection of CHO cells.