CRYSTAL PROPERTY OF THE LARVAL SEA URCHIN SPICULE*

A pair of pluteus skeletal spicules arises from a pair of calcareous granules via the triradiate form. In polarized light, each spicule behaves as though carved out of a single crystal of magnesian calcite. The optic axis lies perpendicular to the plane of the triradiate and parallel to the body rod of the pluteus. However, in the scanning electron microscope, the spicule surface appeared smooth or somewhat spongy and manifested no crystal faces. Neither etching nor fracturing revealed underlying crystalline texture. Nevertheless, rhombohedral calcite crystals could be grown epitaxially onto isolated spicules immersed in a medium containing CaCl₂ and NaHCO₃. The optic axes of all crystals coincided with the optic axis of the spicule on which they were grown. Corresponding faces of the crystals were all aligned parallel to each other despite the complex shape of each spicule. Where the left and right spicules joined, two mutually tilted sets of crystals were observed but not crystals of intermediate orientation. Thus, the sea urchin larval spicule is built from a stack of molecularly contiguous microcrystals but its overall shape is generated by the mesenchyme cells independent of the magnesian calcite crystal habit.     

Evidence for contribution of autophagy to Rubisco degradation during leaf senescence in Arabidopsis thaliana

During leaf senescence, Rubisco is gradually degraded and its components are recycled within the plant. Although Rubisco can be mobilized to the vacuole by autophagy via specific autophagic bodies, the importance of this process in Rubisco degradation has not been shown directly. Here, we monitored Rubisco autophagy during leaf senescence by fusing synthetic green fluorescent protein (sGFP) or monomeric red fluorescent protein (mRFP) with Rubisco in Arabidopsis (Arabidopsis thaliana). When attached leaves were individually exposed to darkness to promote their senescence, the fluorescence of Rubisco‐sGFP was observed in the vacuolar lumen as well as chloroplasts. In addition, release of free‐sGFP due to the processing of Rubisco‐sGFP was observed in the vacuole of individually darkened leaves. This vacuolar transfer and processing of Rubisco‐sGFP was not observed in autophagy‐deficient atg5 mutants. Unlike sGFP, mRFP was resistant to proteolysis in the leaf vacuole of light‐grown plants. The vacuolar transfer and processing of Rubisco‐mRFP was observed at an early stage of natural leaf senescence and was also obvious in leaves naturally covered by other leaves. These results indicate that autophagy contributes substantially to Rubisco degradation during natural leaf senescence as well as dark‐promoted senescence.     

Changes in life‐history traits of the water strider Aquarius paludum in accordance with global warming

Seasonal records of nymphs of the water strider Aquarius paludum Fabricius (Heteroptera: Gerridae) at a waterway in Kochi prefecture, Japan (33°00′N to 33°30′N), in 2007, show that populations of new generation adults occur four or more times during the year, in mid and late May; late July to early August; September; and October to November. In laboratory experiments, more than 50% of adults are reproductive, irrespective of photoperiod, and this ratio increases to 80% even under a short‐day LD 11.5 : 13.5 h photocycle, which corresponds to the winter season at Kochi (33°N). There is a diminishing photoperiodic response in relation to the induction of diapause compared with measurements made in previous years (1995–1997), suggesting that reproduction may be possible over a much longer period in the near future (and even in winter) if local climate warming is sustained. A high proportion of males sampled in 2008 have small testes and a high proportion of females do not have mature oöcytes even in summer. This contrasts with earlier data showing that the testis volume index for the same period is greater in 1995–1997, and that 75% of females have mature oöcytes. These changes suggest that the Kochi‐Nankoku population of A. paludum is beginning to show partial aestivation. Overwintering adults of both sexes are found to have no mature flight muscles in October/November 2008. This is in marked contrast with earlier data from 1995 and 2004. Adults that are reared in the laboratory also show a lower flight propensity in response to shorter day lengths. The absence of mature flight muscles in the autumn and lower flight propensity under shorter days may indicate a cessation of dispersal between the summer habitats and overwintering sites on land far from the waterways. Taken together, these data suggest that populations of A. paludum in the Kochi‐Nankoku region are continuing to show adaptive changes, apparently in relation to global warming.     

Phylogeography of Douglas‐fir based on mitochondrial and chloroplast DNA sequences: testing hypotheses from the fossil record

The integration of fossil and molecular data can provide a synthetic understanding of the ecological and evolutionary history of an organism. We analysed range‐wide maternally inherited mitochondrial DNA and paternally inherited chloroplast DNA sequence data with coalescent simulations and traditional population genetic methods to test hypotheses of population divergence generated from the fossil record of Douglas‐fir (Pseudotsuga menziesii), an ecologically and economically important western North American conifer. Specifically, we tested (i) the hypothesis that the Pliocene orogeny of the Cascades and Sierra Nevada caused the divergence of coastal and Rocky Mountain Douglas‐fir varieties; and (ii) the hypothesis that multiple glacial refugia existed on the coast and in the Rocky Mountains. We found that Douglas‐fir varieties diverged about 2.11 Ma (4.37 Ma–755 ka), which could be consistent with a Pliocene divergence. Rocky Mountain Douglas‐fir probably resided in three or more glacial refugia. More variable molecular markers would be required to detect the two coastal refugia suggested in the fossil record. Comparison of mitochondrial DNA and chloroplast DNA variation revealed that gene flow via pollen linked populations isolated from seed exchange. Postglacial colonization of Canada from coastal and Rocky Mountain refugia near the ice margin at the Last Glacial Maximum produced a wide hybrid zone among varieties that formed almost exclusively by pollen exchange and chloroplast DNA introgression, not seed exchange. Postglacial migration rates were 50–165 m/year, insufficient to track projected 21st century warming in some regions. Although fossil and genetic data largely agree, each provides unique insights.     

DWARF50 (D50), a rice (Oryza sativa L.) gene encoding inositol polyphosphate 5‐phosphatase,is required for proper development of intercalary meristem

Rice internodes are vital for supporting high‐yield panicles, which are controlled by various factors such as cell division, cell elongation and cell wall biosynthesis. Therefore, formation and regulation of the internode cell‐producing intercalary meristem (IM) are important for determining the shape of internodes. To understand the regulation of internode development, we analysed a rice dwarf mutant, dwarf 50 (d50). Previously, we reported that parenchyma cells in the elongated internodes of d50 ectopically deposit cell wall phenolics. In this study, we revealed that D50 encodes putative inositol polyphosphate 5‐phosphatase (5PTase), which may be involved in phosphoinositide signalling required for many essential cellular functions, such as cytoskeleton organization, endocytosis and vesicular trafficking in eukaryotes. Analysis of the rice genome revealed 20 putative 5PTases including D50. The d50 mutation induced abnormally oriented cell division, irregular deposition of cell wall pectins and thick actin bundles in the parenchyma cells of the IM, resulting in abnormally organized cell files of the internode parenchyma and dwarf phenotype. Our results suggest that the putative 5PTase, encoded by D50, is essential for IM formation, including the direction of cell division, deposition of cell wall pectins and control of actin organization.     

Morphological Characterization of First Instar Larvae of Asian Horseshoe Crabs and their Hybrids*

The morphological characters of first instar larvae of three Asian horseshoe crabs and their hybrids were examined. For this purpose, the length of six parts on the larvae, the pattern of pigmentation, the structure of the margin of the opisthosoma, and the distribution and shape of spines on the extracardiac region of the prosoma were recorded. In general, the phenotypes of the hybrids were intermediate between those of the parents, suggesting that both male and female genomes contribute to development of the hybrids. However, there were some exceptional characters and phenotypic variations. Some characters were inherited from only one parent. This was suggested to imply that if the maternal species did not have the gene regulating expression of a given paternal character, the paternal gene did not express this character.