The impact of hydromorphological restoration on river ecological status: a comparison of fish, benthic invertebrates, and macrophytes

The European Water Framework Directive (WFD) has led to an increase in hydromorphological restoration attempts in European rivers, but data on the ecological responses of rivers to these restoration attempts are scarce. We investigated the effects of 24 hydromorphological river restoration projects in Germany. We compared hydromorphological parameters and biological diversity of macroinvertebrates, fish, and macrophytes in restored reaches to nearby unrestored sections. We applied, for the first time, the WFD to assess the results of these restoration projects. While hydromorphology changed significantly in the restored sections, differences between restored and unrestored sections in terms of biological parameters were lower. Positive restoration effects were observed for fish (11 of 24 cases) only. Based on the synthesis of results from the different organism groups, only one of the 24 restored sections reached a “good” Ecological Quality Class as demanded by the WFD. Our results indicate that stressors other than hydromorphological degradation still affect the biota in restored sections. We emphasize the need for advanced restoration strategies based on catchment analyses considering water pollution, source populations, and dispersal capacities of sensitive species, and recommend the inclusion of additional parameters, including societal and stakeholder perspectives, in assessing the initial success of restoration projects.     

Amino acids in segment IVS6 and beta-subunit interaction support distinct conformational changes during Ca(v)2.1 inactivation

Ca(v)2.1 mediates voltage-gated Ca2+ entry into neurons and the release of neurotransmitters at synapses of the central nervous system. An inactivation process that is modulated by the auxiliary beta-subunits regulates Ca2+ entry through Ca(v)2.1. However, the molecular mechanism of this alpha1-beta-subunit interaction remains unknown. Herein we report the identification of new determinants within segment IVS6 of the alpha(1)2.1-subunit that markedly influence channel inactivation. Systematic substitution of residues within IVS6 with amino acids of different size, charge, and polarity resulted in mutant channels with rates of fast inactivation (k(inact)) ranging from a 1.5-fold slowing in V1818I (k(inact) = 0.98 +/- 0.09 s(-1) compared with wild type alpha(1)2.1/alpha2-delta/beta1a k(inact) = 1.35 +/- 0.25 s(-1) to a 75-fold acceleration in mutant M1811Q (k(inact) = 102 +/- 3 s(-1). Coexpression of mutant alpha(1)2.1-subunits with beta(2a) resulted in two different phenotypes of current inactivation: 1) a pronounced reduction in the rate of channel inactivation or 2) an attenuation of a slow component in I(Ba) inactivation. Simulations revealed that these two distinct inactivation phenotypes arise from a beta2a-subunit-induced destabilization of the fast-inactivated state. The IVS6- and beta2a-subunit-mediated effects on Ca(v)2.1 inactivation are likely to occur via independent mechanisms.     

Interpretative difficulties with growth hormone provocative retesting in childhood-onset growth hormone deficiency

A review of literature demonstrates that there are many ill-understood factors that determine the results of GH provocative (re)testing, so that these results should be interpreted with extreme caution when used for diagnosis or confirmation of diagnosis of GHD. GH provocation tests are probably of no value at all for what has been called 'partial GHD'. The phenomenon of 'normalization' of test results after long-term treatment with GH needs no 'transient GHD' hypothesis as it can be largely explained by the very low reproducibility of the tests and by a regression to the mean effect. Moreover, it is possible that 'normal values' increase with age. Other determinants of normal peak values may also change from childhood to adulthood and contribute to 'normalization'.     

Beyond average protein secondary structure content prediction using FTIR spectroscopy

This paper demonstrates that secondary structure information beyond purely protein secondary structure content can be predicted from FTIR (Fourier transform infrared spectroscopy) spectra of proteins with a high degree of accuracy. Both neural networks and adaptive neuro-fuzzy inference systems (ANFISs) were employed to predict helix/sheet segment information. The best results were achieved using ANFISs with fuzzy subtractive clustering based on normalised, compressed amide I data with an average SEP (standard error of prediction, root mean of squared errors) of 1.51. Predictions for average helix/sheet length based merely on the amide I band maximum position in combination with the full-width at half-height resulted in a comparable average SEP of 1.62. This suggests the importance of information on the position and width of the amide I band maximum for the prediction of helix/sheet segment information. Finally, the most promising pattern recognition approaches found in this study were applied to a protein with an as yet unknown x-ray structure: native a1-antichymotrypsin (a1-ACT).     

Predictive value of DNA cytometry in CIN 1 and 2. Image analysis of 193 cases

OBJECTIVE: To investigate DNA image cytometry for predicting the prognosis of cervical intraepithelial neoplasia (CIN). STUDY DESIGN: Smears from 151 women affected by CIN 1 or 2 on cytology with minimal follow-up of three years were included. Sixty-seven showed progression, with histologically confirmed carcinoma in situ or invasive cancer. Eighty-four cases showed regression of the disease, which was cytologically, histologically and colposcopically confirmed. Papanicolaou-stained smears were destained, and the Feulgen reaction was performed with consecutive image DNA cytometry of suspicious cells using an image analysis system (Cires, Zeiss, Germany). The DNA index of the greatest stemline and the number of single aneuploid cells, using 9c exceeding events, were computed. RESULTS: In the group with progression, an aneuploid DNA stemline was found in 25 smears (26.9%). In 64 cases (66.7%) more than one aneuploid event was detected. The total number of aneuploid cases in this group was 76 (81%). In the group without progression, the number of aneuploid stemlines was 2 (2%). Single aneuploid cells could be found in five cases (5%). The overall number of aneuploid cases in that group was five. The sensitivity was 74.3%, positive predictive value 85.2% and negative predictive value 77%. CONCLUSION: Aneuploidy is a marker for prospective malignancy in cervical Papanicolaou smears. DNA image cytometry, as an additional method, can be used to predict outcome in patients with CIN 1 and 2 of the cervix. DNA cytometry is not a screening method but can add further information for a treatment decision in doubtful cases.     

Detection of ecological change using multiple organism groups: metrics and uncertainty

A number of biological approaches are commonly used to assess the ecological integrity of stream ecosystems. Recently, it is becoming increasingly common to use multiple organism groups in bioassessment. Advocates of the multiple organism approach argue that the use of different organism groups should strengthen inference-based models and ultimately result in lower assessment error, while opponents argue that organism groups often respond similarly to stress implying a high degree of redundancy. Using fish, macroinvertebrate, macrophyte and benthic diatom data, site-specific parameters (e.g., water chemistry and substratum) and catchment variables from European mountain (n = 77) and lowland (n = 85) streams we evaluated the discriminatory power and uncertainty associated with the use of a number of biological metrics commonly used in stream assessment. The primary environmental gradient for both streams types was land use and nutrient enrichment. Secondary and tertiary gradients were related to habitat quality or alterations in hydromorphology. Benthic diatom and macroinvertebrate metrics showed high discriminatory power (R² values often >0.50) and low error (<30%) with the primary (nutrient) gradient, while both fish and macrophyte metrics performed relatively poorly. Conversely, both fish and macrophyte metrics showed higher response (high coefficients of determination) than either benthic diatom or macroinvertebrate metrics to the second (e.g., alteration in habitat/hydromorphology) gradient. However, the discriminatory power and error associated with individual metrics varied markedly, indicating that caution should be exercised when selecting the ‘best’ organism group or metric to monitor stress.     

Linking organism groups – major results and conclusions from the STAR project

Here we summarize results of the EU funded research project STAR concerning the suitability of different organism groups (fish, benthic invertebrates, macrophytes, diatoms) for monitoring European rivers. In a general way, the suitability of the organism groups is classified by monitoring type, stress type, river type, temporal scale and taxonomic resolution. For example, although all organism groups are affected by acidification, the relatively low species richness of fish and macrophytes in small mountain streams makes these two groups less suitable, and, hence, we argue that benthic diatoms and/or invertebrates may be considered as more robust indicators. Similar, lines of reasoning are given for a number of stressor and stream types.     

FoxP3+, and not CD25+, T cells increase post-transplant in islet allotransplant recipients following anti-CD25+ rATG immunotherapy

Anti-CD25 antibodies are used as an induction therapy in islet allotransplantation for type 1 diabetes. Although previous reports suggested that anti-CD25 treatment may lead to depletion of CD4+CD25+ regulatory T cells (Tregs) and questioned its use in tolerance-promoting protocols for transplantation, the effect of anti-CD25 antibodies on the frequency and function of Tregs remains unclear. We examined the effect of anti-CD25 antibody, daclizumab, in vivo on Tregs in islet allograft recipients enrolled in a single-center study and monitored post-transplant. Our data shows that the reduction in CD25+ Treg cells observed post-transplant is due to masking of CD25 receptor by daclizumab and not due to depletion. In addition, using Treg marker, FoxP3, we show that anti-CD25+ ATG treatment leads to an increase in FoxP3+ Tregs post-transplant. These data suggest that anti-CD25-based therapy has beneficial effects on Tregs and combined with ATG may be a promising therapy for autoimmunity and transplantation.     

Drivers and stressors of freshwater biodiversity patterns across different ecosystems and scales: a review

The present review with focus on the last decade (2000–2010) aims to (i) collecting the major hypotheses explaining freshwater biodiversity patterns, (ii) identifying the main stressors affecting freshwater biodiversity, and (iii) revealing information gaps regarding ecosystem types, organism groups, spatial and temporal scales to highlight research needs to better propose sound conservation measures. The comparative analysis addresses six organism groups ranging from microorganisms to fish in basins, rivers, lakes, wetlands, ponds and groundwater. Short-term studies at ecoregion and catchment scale focusing on invertebrates, macrophytes and fish in Palaearctic and Nearctic regions dominated. The most frequent hypotheses tested were the landscape filter concept, the species–area relationship, the metacommunity concept. Dominating natural drivers were area, heterogeneity and disturbance. Land use, eutrophication and habitat destruction were identified as most important stressors. Generally, freshwater biodiversity declined in response to these stressors in contrast to increasing biodiversity determined by natural drivers across all ecosystems. Preferred organism groups were fish and invertebrates, most frequently studied in rivers, in contrast to smaller organisms (e.g. bacteria) and, e.g. groundwater being underrepresented. Hypotheses originating from the last century are still tested in freshwater research, while novel concepts are either missing or untested. Protection of freshwater biodiversity is the ultimate challenge since it supports valuable ecosystems services ensuring perpetuation of mankind. For that, comprehensive large-scale studies with holistic approaches are urgently needed.