排序方式: 共有17条查询结果,搜索用时 15 毫秒
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Turbelin Anna J. Diagne Christophe Hudgins Emma J. Moodley Desika Kourantidou Melina Novoa Ana Haubrock Philip J. Bernery Camille Gozlan Rodolphe E. Francis Robert A. Courchamp Franck 《Biological invasions》2022,24(7):2061-2079
Biological Invasions - Introduction pathways play a pivotal role in the success of Invasive Alien Species (IAS)—the subset of alien species that have a negative environmental and/or... 相似文献
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Goesmann A Haubrock M Meyer F Kalinowski J Giegerich R 《Bioinformatics (Oxford, England)》2002,18(1):124-129
MOTIVATION: Beyond methods for a gene-wise annotation and analysis of sequenced genomes new automated methods for functional analysis on a higher level are needed. The identification of realized metabolic pathways provides valuable information on gene expression and regulation. Detection of incomplete pathways helps to improve a constantly evolving genome annotation or discover alternative biochemical pathways. To utilize automated genome analysis on the level of metabolic pathways new methods for the dynamic representation and visualization of pathways are needed. RESULTS: PathFinder is a tool for the dynamic visualization of metabolic pathways based on annotation data. Pathways are represented as directed acyclic graphs, graph layout algorithms accomplish the dynamic drawing and visualization of the metabolic maps. A more detailed analysis of the input data on the level of biochemical pathways helps to identify genes and detect improper parts of annotations. As an Relational Database Management System (RDBMS) based internet application PathFinder reads a list of EC-numbers or a given annotation in EMBL- or Genbank-format and dynamically generates pathway graphs. 相似文献
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Cuthbert Ross N. Diagne Christophe Haubrock Phillip J. Turbelin Anna J. Courchamp Franck 《Biological invasions》2022,24(7):1895-1904
Biological Invasions - Biological invasions are increasing worldwide, damaging ecosystems and socioeconomic sectors. Two decades ago, the “100 of the world’s worst” invasive alien... 相似文献
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Ahmed Danish A. Hudgins Emma J. Cuthbert Ross N. Haubrock Phillip J. Renault David Bonnaud Elsa Diagne Christophe Courchamp Franck 《Biological invasions》2022,24(7):1949-1972
Biological Invasions - The rate of biological invasions is growing unprecedentedly, threatening ecological and socioeconomic systems worldwide. Quantitative understandings of invasion temporal... 相似文献
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Kourantidou Melina Haubrock Phillip J. Cuthbert Ross N. Bodey Thomas W. Lenzner Bernd Gozlan Rodolphe E. Nuez Martin A. Salles Jean-Michel Diagne Christophe Courchamp Franck 《Biological invasions》2022,24(7):1905-1926
Biological Invasions - In addition to being a major threat to biodiversity and ecosystem functioning, biological invasions also have profound impacts on economies and human wellbeing. However, the... 相似文献
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Moodley Desika Angulo Elena Cuthbert Ross N. Leung Brian Turbelin Anna Novoa Ana Kourantidou Melina Heringer Gustavo Haubrock Phillip J. Renault David Robuchon Marine Fantle-Lepczyk Jean Courchamp Franck Diagne Christophe 《Biological invasions》2022,24(7):1995-2016
Biological Invasions - Biological invasions are one of the main threats to biodiversity within protected areas (PAs) worldwide. Meanwhile, the resilience of PAs to invasions remains largely... 相似文献
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CYTOMER is a relational database of organs/tissues, cell types, physiological systems and developmental stages that currently focuses on the human system. From this database, we have derived an ontology for anatomical and morphological structures for the human organism which includes all embryonal stages and the cell types constituting these structures. The ontology has been transferred to the OWL format and is freely available for download at http://cytomer/bioinf.med.uni-goettingen.de. 相似文献
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Nathan Jay Baker Francesca Pilotto Phillip Joschka Haubrock Burkhard Beudert Peter Haase 《Ecology and evolution》2021,11(23):17471
While there has been increasing interest in how taxonomic diversity is changing over time, less is known about how long‐term taxonomic changes may affect ecosystem functioning and resilience. Exploring long‐term patterns of functional diversity can provide key insights into the capacity of a community to carry out ecological processes and the redundancy of species’ roles. We focus on a protected freshwater system located in a national park in southeast Germany. We use a high‐resolution benthic macroinvertebrate dataset spanning 32 years (1983–2014) and test whether changes in functional diversity are reflected in taxonomic diversity using a multidimensional trait‐based approach and regression analyses. Specifically, we asked: (i) How has functional diversity changed over time? (ii) How functionally distinct are the community''s taxa? (iii) Are changes in functional diversity concurrent with taxonomic diversity? And (iv) what is the extent of community functional redundancy? Resultant from acidification mitigation, macroinvertebrate taxonomic diversity increased over the study period. Recovery of functional diversity was less pronounced, lagging behind responses of taxonomic diversity. Over multidecadal timescales, the macroinvertebrate community has become more homogenous with a high degree of functional redundancy, despite being isolated from direct anthropogenic activity. While taxonomic diversity increased over time, functional diversity has yet to catch up. These results demonstrate that anthropogenic pressures can remain a threat to biotic communities even in protected areas. The differences in taxonomic and functional recovery processes highlight the need to incorporate functional traits in assessments of biodiversity responses to global change. 相似文献