Mist Net Effort Required to Inventory a Forest Bat Species Assemblage

Abstract: Little quantitative information exists about the survey effort necessary to inventory temperate bat species assemblages. We used a bootstrap resampling algorithm to estimate the number of mist net surveys required to capture individuals from 9 species at both study area and site levels using data collected in a forested watershed in northwestern California, USA, during 1996–2000. The mean number of simulated surveys required to capture individual species varied with species' rarity and ranged from 1.5 to 44.9. We retrospectively evaluated strategies to reduce required survey effort by subsampling data from 1996 to 1998 and tested the strategies in the field during 1999 and 2000. Using data from 1996 to 1998, the mean number of simulated surveys required to capture 8 out of 9 species was 26.3, but a 95% probability of capture required >61 surveys. Inventory efficiency, defined as the cumulative proportion of species detected per survey effort, improved for both the study area and individual sites by conducting surveys later in summer. We realized further improvements in study area inventory efficiency by focusing on productive sites. We found that 3 surveys conducted between 1 July and 10 September at each of 4 productive sites in this 10-km² study area resulted in the capture of 8 species annually. Quantitative estimation of the survey effort required to assess bat species occurrence improves the ability to plan and execute reliable, efficient inventories. Results from our study should be useful for planning inventories in nearby geographical areas and similar habitat types; further, the analytical methods we used to assess effort are broadly applicable to other survey methods and taxa.     

A reevaluation of Wiwaxia and the polychaetes of the Burgess Shale

Wiwaxia corrugata and the indisputable polychaetes of the Middle Cambrian Burgess Shale, particularly Canadia spinosa, have figured prominently in recent hypotheses about the early evolution of polychaete annelids. Based on similarities between the sclerites of Wiwaxia and the notochaetae of Canadia with the broad notochaetae (paleae) of Recent chrysopetalid polychaetes, these two fossil taxa have been variously treated as closely related to the most highly derived stem forms of the polychaete (and annelid) crown group or as members of a specific, Recent subgroup within Polychaeta, the order Phyllodocida. Chrysopetalidae is a member of Phyllodocida, which is part of the major polychaete clade Aciculata; the latter two taxa are distinguished by four and six well defined autapomorphic characters, respectively. The best preserved or otherwise appropriate fossils of Wiwaxia corrugata, Canadia spinosa and the other polychaetes of the Burgess Shale have been studied in detail in order to determine whether they possess any characters that could support the homology of wiwaxiid sclerites, canadiid notochaetae and chrysopetalid paleae. Most of these fossil taxa have significant autapomorphies but the specific characters of the Aciculata and Phyllodocida are entirely absent. It is demonstrated that constraining cladograms in such a manner that wiwaxiid sclerites, canadiid notochaetae and chrysopetalid paleae are homologous leads to results that are markedly unparsimonious. Furthermore, Canadia and the other polychaetes of the Burgess Shale cannot be referred to any extant subgroup within the Polychaeta and cannot be used to polarize character evolution within the annelid crown group. Apart from its dubious sclerites, Wiwaxia has no characters that could indicate any close relationship with Polychaeta or Annelida.     

The tobacco Ntann12 gene, encoding an annexin, is induced upon Rhodoccocus fascians infection and during leafy gall development

Annexins are calcium-binding proteins that have been associated in plants with different biological processes such as responses to abiotic stress and early nodulation stages. Until now, the implication of annexins during plant–pathogen interactions has not been reported. Here, a novel plant annexin gene induced in tobacco BY-2 cell suspension cultures infected with the phytopathogenic bacterium Rhodococcus fascians (strain D188) has been identified . Expression of this gene, called Ntann12 , is also induced, but to a lower extent, by a strain (D188-5) that is unable to induce leafy gall formation. This gene was also induced in BY-2 cells infected with Pseudomonas syringae but not in cells infected with Agrobacterium tumefaciens or Escherichia coli. Ntann12 expression was also found to be stimulated by abiotic stress, including NaCl and abscissic acid, confirming a putative role in stress signal transduction pathways. In addition, promoter- GUS analyses using homozygous transgenic tobacco seedlings showed that the developmentally controlled expression of Ntann12 is altered upon R. fascians infection. Finally, up-regulation of Ntann12 during leafy gall ontogenesis was confirmed by RT-qPCR. Discussion is focused on the potential role of Ntann12 in biotic and abiotic stress responses and in plant development, both processes that may involve Ca²⁺-dependent signalling.     

Prebreeding moult, plumage and evidence for a presupplemental moult in the Great Knot Calidris tenuirostris

We studied the prebreeding moult and resulting plumage in a long-distance migrant sandpiper (Scolopacidae), the Great Knot Calidris tenuirostris , on the non-breeding grounds (northwest Australia), on arrival at the staging grounds after the first migratory flight (eastern China) and on or near the Russian breeding grounds (Russian data from museum specimens). We show that breeding plumage scores and breast blackness were affected not only by the increase in moulted feathers but also in the wearing down of overlaying pale tips of fresh feathers. Birds migrating from Australia and arriving in China had completed or suspended moult, but more moult must occur in Asia as Russian specimens had moulted more of their mantle and scapular feathers. Russian birds had significantly more red feathering on their upperparts than had birds in Australia or those arriving in China. The increase in reddish feathers cannot by accounted for simply by continuation of the prealternate moult. Instead, a third, presupplemental moult must occur, in which red-marked feathers replace some scapular and especially mantle feathers that were acquired in a prealternate moult only 1–3 months earlier. Great Knot sexes show little size and plumage dimorphism, whereas two other sandpipers that have supplemental plumages (Ruff Philomachus pugnax and Bar-tailed Godwit Limosa lapponica ) are thought to be highly sexually selected. Bidirectional sexual selection may therefore be involved in the evolution of a supplemental plumage in Great Knots.     

Fatty acid composition of consumers in boreal lakes – variation across species,space and time

1. Fatty acids (FAs) have been widely applied as trophic biomarkers in aquatic food web studies. However, current knowledge of inter‐ and intraspecific variation in consumer FA compositions across spatial and temporal scales is constrained to a few pelagic taxa. 2. We analysed the FAs of 22 taxa of benthic macroinvertebrates, zooplankton and fish collected from the littoral, pelagic and profundal habitats of nine boreal oligotrophic lakes over spring, summer and autumn. We quantified and compared the FA variance partitions contributed by species identity (i.e. an integrative effect of phylogenetic origin, life history and functional feeding guild of individual taxa), site and season using partial redundancy analysis both on all consumers and on benthic arthropods alone. 3. Species identity alone contributed 84.4 and 72.8% of explained FA variation of all consumers and benthic arthropods, respectively. Influences of site, season and all joint effects accounted for 0–11.3% only. Fatty acid profiles of primary consumers differentiated below class level, but those of predators were distinguishable only when they became more taxonomically distinct (i.e. among classes or higher). 4. Pelagic and profundal consumers showed stronger reliance on autochthonous resources than did their littoral counterparts as reflected by their higher ω3 to ω6 FA ratios. Polyunsaturated FAs (PUFAs) were increasingly retained with trophic levels, and saturated FAs (e.g. FA 16 : 0) gradually reduced. Ecologically, this trade‐off enhances the trophic transfer efficiency and confirms the importance of PUFA‐rich autotrophs in aquatic food webs. 5. Our findings indicate strong interspecific differences in FA requirements and assimilation among aquatic consumers from a wide range of taxonomic levels, habitats and lakes. Consumers were able to maintain homoeostasis in FA compositions across spatial and temporal changes in resource FAs, but consumer homoeostasis did not limit the effectiveness of FAs as trophic biomarkers.     

Experimental dietary manipulations for determining the relative importance of allochthonous and autochthonous food resources in tropical streams

1. Autochthonous sources of organic matter appear to make a minor contribution to food webs in temperate forest streams, but their roles in supporting consumer biomass in tropical lotic environments have received little attention. We investigated the importance of autochthonous and allochthonous food sources to Brotia hainanensis (Pachychilidae), a detritivorous and algivorous snail common in Hong Kong hillstreams, using experimental dietary manipulations and assimilation-based analyses, including stoichiometry, carbon (C) and nitrogen (N) stable isotopes and fatty acid (FA) profiles.
2. Juvenile B. hainanensis collected in Pak Ngau Shek Stream were cultured under controlled laboratory conditions and fed for 2 months with either conditioned Liquidambar formosana (Hamamelidaceae) leaf litter or periphyton. Samples of B. hainanensis were also collected from the stream at the end of the experiment for comparison with snails reared in the laboratory.
3. Periphyton and leaf litter exhibited marked differences in C/N ratios, δ ¹³C and δ ¹⁵N values and FA profiles. Stable isotope analysis and FA profiling of laboratory-reared and field-collected B. hainanensis both confirmed that snails relied primarily on autochthonous foods, especially periphytic diatoms and cyanobacteria. Stoichiometry results indicated that periphyton was a more nutritious food (with lower C/N ratio) than leaf litter.
4. This is the first study demonstrating that the combined use of stable isotopes and FA profiles is an effective diagnostic tool to trace the basal food sources of consumers in natural stream habitats. Our findings further support the hypothesis that primary production in tropical streams is generally more important to aquatic consumers than inputs of terrestrial detritus.