LIPIDAT: a database of lipid phase transition temperatures and enthalpy changes. DMPC data subset analysis.

The systematic study of the mesomorphic phase properties of synthetic and biologically derived lipids began some 30 years ago. In the past decade, interest in this area has grown enormously. As a result, there exists a wealth of information on lipid phase behavior, but unfortunately these data have until now been scattered throughout the literature in a variety of books, proceedings and journals. The data have recently been compiled in a centralized database, LIPIDAT, with a view to providing ready access to the data and to the appropriate literature. LIPIDAT consists of a tabulation of all known mesomorphic and polymorphic phase transition temperatures and enthalpy changes for synthetic and biologically-derived lipids in the dry and in the partially and fully hydrated states. Also included is the effect of pH, and of salt and metal ion concentration and other additives such as proteins, drugs, etc., on the thermodynamic values. The methods used in making the measurements and the experimental conditions are reported. Bibliographic information includes comprehensive literature referencing and list of authors, but does not at the present time include article titles. As of this writing, the database is current through June, 1990 and is approaching 10,000 records in length. Each record contains 28 fields. In this paper we report the contents and present an analysis of LIPIDAT as it refers to fully hydrated 1,2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC). This database subset represents about 7% of all LIPIDAT records. It includes data collected over a 23-year period from 1967 to 1989 and consists of 702 records obtained from 336 articles in 55 different journals. The number of records per year rises steadily beginning in 1971, reaches a maximum of 89 records/year in 1977 and remains relatively constant at 60-70 records/year in the succeeding period. Journals making the greatest contribution to the DMPC subset include Biochimica et Biophysica Acta, Biochemistry, Chemistry and Physics of Lipids and the Biophysical Journal. These four journals account for 71% of the total records in the database subset. The analysis shows that differential scanning calorimetry, electron spin resonance, fluorescence, nuclear magnetic resonance and Raman spectroscopy are the methods most commonly used for DMPC transition temperature determination. An interesting pattern emerges as to the place in time the different methods assume or loose popularity.(ABSTRACT TRUNCATED AT 400 WORDS)     

Uranyl acetate induces gel phase formation in model lipid and biological membranes.

The effect of uranyl acetate on the mesomorphic phase state of lipids in model membranes as well as in isolated biological membranes has been examined. As little as 0.8 mM (0.03% [wt/vol]) uranyl acetate induces a liquid crystal-to-gel phase transformation in egg phosphatidic acid, bovine brain phosphatidylserine, and in lysed chromaffin granule membranes. These results along with others in the literature indicate that the uranyl acetate used in samples for electron microscopy could alter membrane morphology.     

A temperature gradient method for lipid phase diagram construction using time-resolved x-ray diffraction.

A method that enables temperature-composition phase diagram construction at unprecedented rates is described and evaluated. The method involves establishing a known temperature gradient along the length of a metal rod. Samples of different compositions contained in long, thin-walled capillaries are positioned lengthwise on the rod and "equilibrated" such that the temperature gradient is communicated into the sample. The sample is then moved through a focused, monochromatic synchroton-derived x-ray beam and the image-intensified diffraction pattern from the sample is recorded on videotape continuously in live-time as a function of position and, thus, temperature. The temperature at which the diffraction pattern changes corresponds to a phase boundary, and the phase(s) existing (coexisting) on either side of the boundary can be identified on the basis of the diffraction pattern. Repeating the measurement on samples covering the entire composition range completes the phase diagram. These additional samples can be conveniently placed at different locations around the perimeter of the cylindrical rod and rotated into position for diffraction measurement. Temperature-composition phase diagrams for the fully hydrated binary mixtures, dimyristoylphosphatidylcholine (DMPC)/dipalmitoylphosphatidylcholine (DPPC) and dipalmitoylphosphatidylethanolamine (DPPE)/DPPC, have been constructed using the new temperature gradient method. They agree well with and extend the results obtained by other techniques. In the DPPE/DPPC system structural parameters as a function of temperature in the various phases including the subgel phase are reported. The potential limitations of this steady-state method are discussed.     

Kinetics and mechanism of the lamellar gel/lamellar liquid-crystal and lamellar/inverted hexagonal phase transition in phosphatidylethanolamine: a real-time X-ray diffraction study using synchrotron radiation

A study of the kinetics and mechanism of the thermotropic lamellar gel/lamellar liquid-crystalline and lamellar/inverted hexagonal phase transition in dihexadecylphosphatidylethanolamine (DHPE) at various hydration levels has been carried out. Measurements were made by using a real-time X-ray diffraction method at the Cornell High Energy Synchrotron Source. This represents an extension of an earlier study concerning the lamellar gel/lamellar liquid-crystalline phase transition in dipalmitoylphosphatidylcholine [Caffrey, M., & Bilderback, D. H. (1984) Biophys. J. 45, 627-631]. With DHPE, the chain-melting and the nonbilayer transitions were examined under active heating and passive cooling conditions by using a temperature jump to effect phase transformation. Measurements were made at hydration levels ranging from 0% to 60% (w/w) water, and in all cases, the transitions were found to be repeatable, be reversible, and have an upper bound on the transit times (time required to complete the transition) of less than or equal to 3 s. The shortest transit time recorded for the chain-melting and lamellar/hexagonal transitions was less than 1 s. At 8% (w/w) water, the transit times were still on the order of seconds even though the transition does not involve the intermediate L alpha phase. Note, the measured transit times are gross values incorporating the intrinsic transit time in addition to the time required to heat or cool the sample through the transition temperature range and to supply or remove the latent heat of the transition. Regardless of the direction of the transition, both appear to be two state to within the sensitivity limits of the real-time method. From simultaneous wide- and low-angle measurements at the lamellar chain-melting transition, loss of long-range order in the lamellar gel phase appears to precede the chain-melting process. On the basis of the real-time X-ray diffraction measurements, a mechanism is proposed for the lamellar/hexagonal phase transition. The mechanism does not involve large or energetically expensive molecular rearrangements, leads directly to a hexagonal lattice coplanar with the lamellar phase, incorporates facile reversibility, repeatability, and cooperativity, accounts for an observed, apparent memory in the hexagonal phase of the original lamellar phase orientation, and is consistent with the experimental observation of a predominantly two-state transition. In conjunction with the kinetic measurements, the DHPE/water phase diagram was constructed. At and above 12% (w/w) water, the thermotropic transition sequence is L beta'/L alpha/HII.(ABSTRACT TRUNCATED AT 400 WORDS)     

Hemolysis of rabbit erythrocytes in the presence of copper ions

The hemolysis of red blood cells (RBC) induced by Cu(II) is modified by ceruloplasmin (Cp) and albumin. The time course of hemolysis for rabbit RBC by Cu(II) consisted of two parts, an induction period followed by a catastrophic lysis period. The induction period decreased and the lysis rate increased with increasing Cu(II) concentration. Cp or albumin, modified Cu(II) induced hemolysis, by increasing the duration of the induction period and decreasing the overall rate of hemolysis of RBC. The catastrophic lysis period coincided with a sharp increase in the formation of metHb within the cell and in a rapid uptake of Cu(II). The presence of Cp led to an increase in the induction period prior to the rapid increase in metHb formation and in Cu(II) uptake. Porcine Cp was prepared with either two or three nonprosthetic copper binding sites (sites where Cu(II) is easily removed by passing over Chelex-100). Cp with three nonprosthetic binding sites gave more protection than Cp with two. Likewise, albumin can be prepared with three and five nonprosthetic copper binding sites. The albumin with five sites gave more protection than the albumin with three sites.     

Glyphosate in fisheries management

Glyphosate is the active ingredient of the broad-spectrum, translocated herbicide Roundup. Glyphosate is cleared for safe use in or near watercourses, being rated virtually non-toxic by the World Health Organisation. Trials in and alongside Irish fishery watercourses first commenced in 1989 and are continuing to date. The aim of this work is to evaluate the product's efficacy in clearing nuisance reed species in recreational fisheries. The longevity of control and impact on the habitat and its fauna is also investigated. Trials in canal fisheries have demonstrated the capacity of glyphosate to remove obstructive stands of reeds (mainly Schoenoplectus lacustris, Glyceria maxima, Phragmites australis, Sparganium erectum and Typha latifolia), so creating reed-free areas and swims for anglers. These swims remained open for three years following a single application. In 1992 a trial over a 3 km length of the River Boyne, a renowned salmonid fishery, was undertaken. The results clearly demonstrated the ability of glyphosate to provide long-term control of dense (354 shoots m^–2) Schoenoplectus infestations in a large watercourse. In the year following, less than one shoot per m² was present in the channel. In 1994 a small increase in density (7.6 shoots m^–2 was recorded, so enabling unobstructed angling in a stretch of river that had been virtually unfishable for years. Trout (Salmo trutta L.) and salmon (Salmo salar L.) also used the newly exposed gravels for spawning in the winter of 1993, thereby improving fish recruitment and production in the fishery.     

Denitrification measurements in aquatic sediments: A comparison of three methods

Measurements of denitrification using the acetylene inhibition,¹⁵N isotope tracer, and N₂ flux methods were carried out concurrently using sediment cores from Vilhelmsborg sø, Denmark, in an attempt to clarify some of the limitations of each technique. Three experimental treatments of overlying water were used: control, nitrate enriched, and ammonia enriched water. The N₂ flux and¹⁵N tracer experiments showed high rates of coupled nitrification/denitrification in the sediments. The acetylene inhibition method did not capture any coupled nitrification/denitrification. This could be explained by acetylene inhibition of nitrification. A combined¹⁵N tracer/acetylene inhibition experiment demonstrated that acetylene inhibition of N₂O reduction was incomplete and the method, therefore, only measured approximately 50% of the denitrification due to nitrate from the overlying water. Similar rates of denitrification due to nitrate in the overlying water were measured by the N₂ flux method and the acetylene inhibition method, after correcting for the 50% efficiency of acetylene inhibition. Rates of denitrification due to nitrate from the overlying water measured by the¹⁵N tracer method, however, were only approximately 35% or less of those measured by the acetylene inhibition or N₂ flux methods.     

Effect of organic loading on nitrification and denitrification in a marine sediment microcosm

Abstract The effects of organic additions on nitrification and dentrification were examined in sediment microcosms. The organic material, heat killed yeast, had a C/N ratio of 7.5 and was added to sieved, homogenized sediments. Four treatments were compared: no addition (control), 30 g dry weight (dw) m⁻² mixed throughout the 10 cm sediment column (30M), 100 g dw m⁻² mixed throughout sediments (100M), and 100 g dw m⁻² mixed into top 1 cm (100S). After the microcosms had been established for 7–11 days, depth of O₂ penetration, sediment-water fluxes and nitrification rates were measured. Nitrification rates were measured using three different techniques: N-serve and acetylene inhibition in intact cores, and nitrification potentials in slurris. Increased organic additions decreased O₂ penetration from 2.7 to 0.2 mm while increasing both O₂ consumption, from 30 to 70 mmol O₂ m⁻² d⁻¹, and NO₃⁻ flux into sediments. Nitrification rates in intact cores were similar for the two methods. Highest rates occurred in the 30M treatment, while the lowest rate was measured in the 100S treatment. Total denitrification rates (estimated from nitrification and nitrate fluxes) increased with increased organic addition, because of the high concentrations of NO₃⁻ (40 μM) in the overlaying water. The ratio of nitrification: denitrification was used as an indication of the importance of nitrification as the NO₃⁻ supply for denitrificaion. This ratio decreased from 1.55 to 0.05 iwth increase organic addition.