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排序方式: 共有112条查询结果,搜索用时 15 毫秒
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Summary The use of reticulated polyurethane foam as a support material for the immobilization of methanogenic associations and its application to the anaerobic treatment of fine particulate solid wastes was investigated. The colonization of polyurethane support particles in a continuous upflow reactor fed on a mixture of acetate, propionate and butyrate, was both rapid and dense. The combination of rumen microorganisms and colonized support particles in a two-phase digester resulted in an efficient anaerobic decomposition of papermill sludge. 相似文献
3.
Genetic and physical mapping of a novel region close to the fragile X site on the human X chromosome 总被引:11,自引:0,他引:11
M. N. Patterson M. V. Bell J. Bloomfield T. Flint H. Dorkins S. N. Thibodeau D. Schaid G. Bren C. E. Schwartz b. Wieringa H. -H. Ropers D. F. Callen G. Sutherland U. Froster-Iskenius H. Vissing K. E. Davies 《Genomics》1989,4(4):570-578
We report the isolation and characterization of a novel DNA marker (1A1) in Xqter in the region of the fragile X. Genetic studies in families segregating for the fragile X syndrome suggest that 1A1 lies between the disease mutation and the distal locus, DXS52. Studies in normal and fragile X families show that 1A1 is tightly linked to DXS52 (Zmax = 17.20; theta max = 0.03) and F8 (Zmax = 7.01; theta max = 0.08). Multipoint mapping of families supports the order Xcen-DXS105-FRAXA-1A1-DXS52-(F8, DXS115)-Xqter. Pulsed-field gel electrophoresis (PFGE) studies demonstrate that 1A1 defines a new region of at least 2 Mb of DNA not physically linked to DXS52 or F8, thus extending the physical map of Xq27-qter to over 4 Mb. Complex partial digestion PFGE patterns, probably due to differing degrees of methylation, are observed with 1A1 in unrelated normal and fragile-X-positive individuals, whereas other distal markers give uniform digestion profiles. Physical data suggest that 1A1 lies in a region less CpG rich than other distal markers in Xq27-qter. 相似文献
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L. Banci I. Bertini K. L. Bren M. A. Cremonini H. B. Gray C. Luchinat P. Turano 《Journal of biological inorganic chemistry》1996,1(2):117-126
The availability of NOE constraints and of the relative solution structure of a paramagnetic protein permits the use of pseudocontact
shifts as further structural constraints. We have developed a strategy based on: (1) determination of the χ tensor anisotropy
parameters from the starting structure; (2) recalculation of a new structure by using NOE and pseudocontact shift constraints simultaneously; (3) redetermination of the χ tensor anisotropy parameters from the new structure,
and so on until self-consistency. The system investigated is the cyanide derivative of a variant of the oxidized Saccharomyces cerevisiae iso-1-cytochrome c containing the Met80Ala mutation. The structure has been substantially refined. It is shown that the analysis of the deviation
of the experimental pseudocontact shifts from those calculated using the starting structure may be unsound, as may the simple
structure refinement based on the pseudocontact shift constraints only.
Received: 11 July 1995 / Accepted: 30 October 1995 相似文献
6.
Demin Konstantin A. Refeld Aleksandr G. Bogdanova Anna A. Prazdnova Evgenya V. Popov Igor V. Kutsevalova Olga Yu. Ermakov Alexey M. Bren Anzhelica B. Rudoy Dmitry V. Chistyakov Vladimir A. Weeks Richard Chikindas Michael L. 《Probiotics and antimicrobial proteins》2021,13(4):926-948
Probiotics and Antimicrobial Proteins - Pathogenic Candida and infections caused by those species are now considered as a serious threat to public health. The treatment of candidiasis is... 相似文献
7.
Leeat Keren Ora Zackay Maya Lotan‐Pompan Uri Barenholz Erez Dekel Vered Sasson Guy Aidelberg Anat Bren Danny Zeevi Adina Weinberger Uri Alon Ron Milo Eran Segal 《Molecular systems biology》2013,9(1)
Most genes change expression levels across conditions, but it is unclear which of these changes represents specific regulation and what determines their quantitative degree. Here, we accurately measured activities of ~900 S. cerevisiae and ~1800 E. coli promoters using fluorescent reporters. We show that in both organisms 60–90% of promoters change their expression between conditions by a constant global scaling factor that depends only on the conditions and not on the promoter's identity. Quantifying such global effects allows precise characterization of specific regulation—promoters deviating from the global scale line. These are organized into few functionally related groups that also adhere to scale lines and preserve their relative activities across conditions. Thus, only several scaling factors suffice to accurately describe genome‐wide expression profiles across conditions. We present a parameter‐free passive resource allocation model that quantitatively accounts for the global scaling factors. It suggests that many changes in expression across conditions result from global effects and not specific regulation, and provides means for quantitative interpretation of expression profiles. 相似文献
8.
Mazanko Maria S. Makarenko Maksim S. Chistyakov Vladimir A. Usatov Alexander V. Prazdnova Evgeniya V. Bren Anzhelika B. Gorlov Ivan F. Komarova Zoya B. Weeks Richard Chikindas Michael L. 《Probiotics and antimicrobial proteins》2019,11(4):1324-1329
Probiotics and Antimicrobial Proteins - A promising approach for slowing down the rate of reproductive aging is the use of probiotic bacteria as a feed additive. In the current study was... 相似文献
9.
McRee DE Williams PA Sridhar V Pastuszyn A Bren KL Patel KM Chen Y Todaro TR Sanders D Luna E Fee JA 《The Journal of biological chemistry》2001,276(9):6537-6544
Cytochrome rC(557) is an improperly matured, dimeric cytochrome c obtained from expression of the "signal peptide-lacking" Thermus thermophilus cycA gene in the cytoplasm of Escherichia coli. It is characterized by its Q(00) (or alpha-) optical absorption band at 557 nm in the reduced form (Keightley, J. A., Sanders, D., Todaro, T. R., Pastuszyn, A., and Fee, J. A. (1998) J. Biol. Chem. 273, 12006-12016). We report results of a broad ranging, biochemical and spectral characterization of this protein that reveals the presence of a free vinyl group on the porphyrin and a disulfide bond between the protomers and supports His-Met ligation in both valence states of the iron. A 3-A resolution x-ray structure shows that, in comparison with the native protein, the heme moiety is rotated 180 degrees about its alpha,gamma-axis; cysteine 14 has formed a thioether bond with the 2-vinyl of pyrrole ring I instead of the 4-vinyl of pyrrole ring II, as occurs in the native protein; and a cysteine 11 from each protomer has formed an intermolecular disulfide bond. Numerous, minor perturbations exist within the structure of rC(557) in comparison with that of native protein, which result from heme inversion and protein-protein interactions across the dimer interface. The unusual spectral properties of rC(557) are rationalized in terms of this structure. 相似文献
10.
Curariform alkaloids competitively inhibit muscle acetylcholine receptors (AChR) by bridging the alpha and non-alpha subunits that form the ligand-binding site. Here we delineate bound orientations of d-tubocurarine (d-TC) and its methylated derivative metocurine using mutagenesis, ligand binding measurements, and computational methods. When tested against a series of lysine mutations in the epsilon subunit, the two antagonists show marked differences in the consequences of the mutations on binding affinity. The mutations epsilon L117K, epsilon Y111K, and epsilon L109K decrease affinity of metocurine by up to 3 orders of magnitude but only slightly alter affinity of d-TC. At the alpha subunit face of the binding site, the mutation alpha Y198T decreases affinity of both antagonists, but alpha Y198F preferentially enhances affinity of d-TC. Computation of antagonist docking orientations, based on our structural model of the alpha-epsilon site of the human AChR, indicates distinct orientations of each antagonist; the flatter metocurine fits into a pocket formed principally by the epsilon subunit, whereas the more compact d-TC spans the narrower crevasse between alpha and epsilon subunits. The side chains of epsilon Tyr-111 and epsilon Thr-117 juxtapose one of two quaternary nitrogens in metocurine but are remote from the equivalent quaternary nitrogen in d-TC, which instead closely approaches alpha Tyr-198. The different docked orientations arise through tilt of the curariform scaffold by approximately 60 degrees normal to the nitrogen-nitrogen axis, together with a 20 degrees rotation about the axis. The overall mutagenesis and computational results show that despite their similar structures, d-TC and metocurine bind in distinctly different orientations to the adult human AChR. 相似文献